STRINGSTRING
Q8LI48_ORYSJ Q8LI48_ORYSJ A0A0P0X908 A0A0P0X908 A0A0P0X2H5 A0A0P0X2H5 A0A0P0WRF1 A0A0P0WRF1 A0A0P0WEK5 A0A0P0WEK5 A0A0P0VZM1 A0A0P0VZM1 A0A0P0VS32 A0A0P0VS32 A0A0P0VDK6 A0A0P0VDK6 A0A0P0V8T3 A0A0P0V8T3 A0A0N7KTE8 A0A0N7KTE8 A0A0N7KJV4 A0A0N7KJV4 Q9FWV0_ORYSJ Q9FWV0_ORYSJ OsRPT4 OsRPT4 OsPBG1 OsPBG1 PBD1 PBD1 PBC1 PBC1 OsPBB1 OsPBB1 OsPBA1 OsPBA1 PAG1 PAG1 PAE1 PAE1 PAA1 PAA1 Q9LWT8_ORYSJ Q9LWT8_ORYSJ A0A0P0XN22 A0A0P0XN22 A0A0P0XRM8 A0A0P0XRM8 A0A0P0Y5Q1 A0A0P0Y5Q1 A0A0P0YBV3 A0A0P0YBV3 A0A0P0YC82 A0A0P0YC82 A3BHX7_ORYSJ A3BHX7_ORYSJ A3BMD4_ORYSJ A3BMD4_ORYSJ B7F961_ORYSJ B7F961_ORYSJ C7J702_ORYSJ C7J702_ORYSJ PBF1 PBF1 RPN10 RPN10 RPT1A RPT1A RPT1B RPT1B PAC1A PAC1A P0015E04.34 P0015E04.34 TBP1 TBP1 TBP2 TBP2 RPS27AB RPS27AB PAF1 PAF1 RCA RCA CYCH1-1 CYCH1-1 PAB1 PAB1 Q10Q05_ORYSJ Q10Q05_ORYSJ Q2QMR3_ORYSJ Q2QMR3_ORYSJ Q2R4I6_ORYSJ Q2R4I6_ORYSJ Q2R4Y2_ORYSJ Q2R4Y2_ORYSJ Q5SNC0_ORYSJ Q5SNC0_ORYSJ Q5SNL8_ORYSJ Q5SNL8_ORYSJ Q5VPF1_ORYSJ Q5VPF1_ORYSJ OsJ_20263 OsJ_20263 Q5ZD18_ORYSJ Q5ZD18_ORYSJ Q651E6_ORYSJ Q651E6_ORYSJ SKP20 SKP20 Q653E3_ORYSJ Q653E3_ORYSJ Q69Q32_ORYSJ Q69Q32_ORYSJ Q69Q88_ORYSJ Q69Q88_ORYSJ Q69X47_ORYSJ Q69X47_ORYSJ Q6F321_ORYSJ Q6F321_ORYSJ Q6H4D0_ORYSJ Q6H4D0_ORYSJ Q6H4D4_ORYSJ Q6H4D4_ORYSJ SKP5 SKP5 Q6H5Q3_ORYSJ Q6H5Q3_ORYSJ Q6H5Q8_ORYSJ Q6H5Q8_ORYSJ Q6H800_ORYSJ Q6H800_ORYSJ Q6H852_ORYSJ Q6H852_ORYSJ Q6I605_ORYSJ Q6I605_ORYSJ SKP1 SKP1 Q6Z875_ORYSJ Q6Z875_ORYSJ Q6Z8A9_ORYSJ Q6Z8A9_ORYSJ Q6Z921_ORYSJ Q6Z921_ORYSJ Q6ZDJ1_ORYSJ Q6ZDJ1_ORYSJ Q6ZIB4_ORYSJ Q6ZIB4_ORYSJ Q7G6D8_ORYSJ Q7G6D8_ORYSJ OsRPT6 OsRPT6 Q7X5X9_ORYSJ Q7X5X9_ORYSJ Q7XAL5_ORYSJ Q7XAL5_ORYSJ Q7XE44_ORYSJ Q7XE44_ORYSJ Q7XN85_ORYSJ Q7XN85_ORYSJ Q7XW77_ORYSJ Q7XW77_ORYSJ Q8GVW5_ORYSJ Q8GVW5_ORYSJ Q8H5C3_ORYSJ Q8H5C3_ORYSJ Q8H5C9_ORYSJ Q8H5C9_ORYSJ Q8L561_ORYSJ Q8L561_ORYSJ Q8LI46_ORYSJ Q8LI46_ORYSJ Q8LI49_ORYSJ Q8LI49_ORYSJ OsRPT2b OsRPT2b Q94E72_ORYSJ Q94E72_ORYSJ OsPAA2 OsPAA2 RPS27AA RPS27AA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Q8LI48_ORYSJOs07g0625300 protein; Belongs to the SKP1 family. (277 aa)
A0A0P0X908Os07g0625400 protein; Belongs to the SKP1 family. (205 aa)
A0A0P0X2H5Os07g0144900 protein. (54 aa)
A0A0P0WRF1Os06g0111200 protein. (428 aa)
A0A0P0WEK5Os04g0608500 protein. (308 aa)
A0A0P0VZM1Os03g0576400 protein. (110 aa)
A0A0P0VS32Os03g0107000 protein; Belongs to the SKP1 family. (240 aa)
A0A0P0VDK6Os02g0101600 protein; Belongs to the SKP1 family. (161 aa)
A0A0P0V8T3Os01g0771600 protein. (208 aa)
A0A0N7KTE8Os11g0707050 protein. (72 aa)
A0A0N7KJV4Os04g0661900 protein. (170 aa)
Q9FWV0_ORYSJUbiquitin fusion protein, putative, expressed. (147 aa)
OsRPT426S proteasome regulatory particle triple-A ATPase subunit4. (400 aa)
OsPBG1Proteasome subunit beta; Belongs to the peptidase T1B family. (256 aa)
PBD1Proteasome subunit beta type-2; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity); Belongs to the peptidase T1B family. (212 aa)
PBC1Proteasome subunit beta type-3; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1B family. (204 aa)
OsPBB1Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (272 aa)
OsPBA1Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (246 aa)
PAG1Proteasome subunit alpha type-3; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family. (249 aa)
PAE1Proteasome subunit alpha type-5; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family. (237 aa)
PAA1Proteasome subunit alpha type-6; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity); Belongs to the peptidase T1A family. (246 aa)
Q9LWT8_ORYSJOs06g0113800 protein; Belongs to the SKP1 family. (166 aa)
A0A0P0XN22Os09g0412050 protein; Belongs to the SKP1 family. (168 aa)
A0A0P0XRM8Os10g0141400 protein. (324 aa)
A0A0P0Y5Q1Os11g0707100 protein. (200 aa)
A0A0P0YBV3Os12g0590066 protein. (95 aa)
A0A0P0YC82Os12g0595600 protein. (164 aa)
A3BHX7_ORYSJOs07g0226000 protein. (79 aa)
A3BMD4_ORYSJOs07g0625600 protein; Belongs to the SKP1 family. (178 aa)
B7F961_ORYSJcDNA, clone: J075093E01, full insert sequence. (292 aa)
C7J702_ORYSJOs09g0246500 protein. (181 aa)
PBF1Proteasome subunit beta type-1; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1B family. (221 aa)
RPN1026S proteasome non-ATPase regulatory subunit 4 homolog; Plays a role in maintaining the structural integrity of the 19S regulatory particle (RP), subcomplex of the 26S proteasome. Plays a major role in both the direct and indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP). Binds and presumably selects ubiquitin-conjugates for destruction. Belongs to the proteasome subunit S5A family. (402 aa)
RPT1A26S proteasome regulatory subunit 7A; The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex (By similarity). (426 aa)
RPT1B26S proteasome regulatory subunit 7B; The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex (By similarity). (426 aa)
PAC1AProteasome subunit alpha type-4-1; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family. (250 aa)
P0015E04.34Proteasome subunit alpha type-4-3; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family. (250 aa)
TBP126S proteasome regulatory subunit 6A homolog; The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex (By similarity). (429 aa)
TBP226S proteasome regulatory subunit 4 homolog; The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex (By similarity). (448 aa)
RPS27ABUbiquitin-40S ribosomal protein S27a-2; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] (155 aa)
PAF1Proteasome subunit alpha type-1; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family. (270 aa)
RCARibulose bisphosphate carboxylase/oxygenase activase, chloroplastic; Activation of RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase; EC 4.1.1.39) involves the ATP-dependent carboxylation of the epsilon-amino group of lysine leading to a carbamate structure. (466 aa)
CYCH1-1Cyclin-H1-1; Involved in cell cycle regulation. May be a regulatory subunit of CDKD-1/CAK-R2. (330 aa)
PAB1Proteasome subunit alpha type-2; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family. (235 aa)
Q10Q05_ORYSJcDNA clone:J013000H02, full insert sequence. (385 aa)
Q2QMR3_ORYSJSkp1 family, dimerisation domain containing protein, expressed. (157 aa)
Q2R4I6_ORYSJCDK-activating kinase assembly factor MAT1 family protein, expressed. (195 aa)
Q2R4Y2_ORYSJcDNA clone:006-202-E04, full insert sequence. (190 aa)
Q5SNC0_ORYSJOs06g0173100 protein; Belongs to the AAA ATPase family. (429 aa)
Q5SNL8_ORYSJcDNA clone:J033143J20, full insert sequence. (195 aa)
Q5VPF1_ORYSJProteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (246 aa)
OsJ_20263Proteasome subunit alpha type-4-2; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family. (250 aa)
Q5ZD18_ORYSJOs01g0771800 protein. (189 aa)
Q651E6_ORYSJcDNA, clone: J090082D24, full insert sequence. (210 aa)
SKP20SKP1-like protein 20; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, a RING-box and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1; Belongs to the SKP1 family. (175 aa)
Q653E3_ORYSJOs09g0560200 protein; Belongs to the AAA ATPase family. (448 aa)
Q69Q32_ORYSJcDNA clone:001-044-C12, full insert sequence; Belongs to the AAA ATPase family. (401 aa)
Q69Q88_ORYSJOs09g0420600 protein. (213 aa)
Q69X47_ORYSJcDNA clone:J013034M24, full insert sequence; Belongs to the AAA ATPase family. (423 aa)
Q6F321_ORYSJProteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (249 aa)
Q6H4D0_ORYSJcDNA clone:J023074H10, full insert sequence; Belongs to the SKP1 family. (160 aa)
Q6H4D4_ORYSJOs09g0274800 protein; Belongs to the SKP1 family. (172 aa)
SKP5SKP1-like protein 5; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, a RING-box and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1; Belongs to the SKP1 family. (165 aa)
Q6H5Q3_ORYSJOs09g0274400 protein; Belongs to the SKP1 family. (167 aa)
Q6H5Q8_ORYSJcDNA clone:002-135-C08, full insert sequence; Belongs to the SKP1 family. (167 aa)
Q6H800_ORYSJProteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (204 aa)
Q6H852_ORYSJProteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (235 aa)
Q6I605_ORYSJcDNA clone:001-044-G10, full insert sequence. (526 aa)
SKP1SKP1-like protein 1; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, a RING-box and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1. (173 aa)
Q6Z875_ORYSJcDNA clone:J023091H23, full insert sequence; Belongs to the AAA ATPase family. (419 aa)
Q6Z8A9_ORYSJOs02g0225100 protein. (198 aa)
Q6Z921_ORYSJ26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (987 aa)
Q6ZDJ1_ORYSJOs08g0375500 protein; Belongs to the SKP1 family. (169 aa)
Q6ZIB4_ORYSJProteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (219 aa)
Q7G6D8_ORYSJOs10g0155200 protein. (117 aa)
OsRPT626S proteasome regulatory particle triple-A ATPase subunit6; Belongs to the AAA ATPase family. (424 aa)
Q7X5X9_ORYSJcDNA clone:J013000B21, full insert sequence. (425 aa)
Q7XAL5_ORYSJcDNA clone:J033085C17, full insert sequence; Belongs to the SKP1 family. (190 aa)
Q7XE44_ORYSJSkp1 family, dimerisation domain containing protein; Belongs to the SKP1 family. (220 aa)
Q7XN85_ORYSJOs04g0658300 protein. (441 aa)
Q7XW77_ORYSJcDNA clone:J023092N19, full insert sequence; Belongs to the AAA ATPase family. (357 aa)
Q8GVW5_ORYSJOs08g0375700 protein; Belongs to the SKP1 family. (169 aa)
Q8H5C3_ORYSJOs07g0145300 protein; Belongs to the SKP1 family. (164 aa)
Q8H5C9_ORYSJOs07g0144800 protein; Belongs to the SKP1 family. (157 aa)
Q8L561_ORYSJOs07g0624900 protein; Belongs to the SKP1 family. (200 aa)
Q8LI46_ORYSJcDNA clone:002-113-F08, full insert sequence; Belongs to the SKP1 family. (174 aa)
Q8LI49_ORYSJOs07g0625200 protein; Belongs to the SKP1 family. (221 aa)
OsRPT2b26S proteasome regulatory particle triple-A ATPase subunit2b; Belongs to the AAA ATPase family. (450 aa)
Q94E72_ORYSJOs01g0511300 protein. (385 aa)
OsPAA2Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (253 aa)
RPS27AAUbiquitin-40S ribosomal protein S27a-1; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] (155 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (28%) [HD]