STRINGSTRING
Q8GVW5_ORYSJ Q8GVW5_ORYSJ A0A0N7KGL3 A0A0N7KGL3 A0A0P0VDK6 A0A0P0VDK6 A0A0P0VS32 A0A0P0VS32 A0A0P0W616 A0A0P0W616 A0A0P0WRF1 A0A0P0WRF1 A0A0P0X2H5 A0A0P0X2H5 A0A0P0X908 A0A0P0X908 A0A0P0XN22 A0A0P0XN22 A0A0P0YC82 A0A0P0YC82 A3BMD4_ORYSJ A3BMD4_ORYSJ PP2A4 PP2A4 RPS27AB RPS27AB PP2A1 PP2A1 CYCD5-1 CYCD5-1 PP2A3 PP2A3 CYCD2-1 CYCD2-1 CYCD3-2 CYCD3-2 Q0JDB0_ORYSJ Q0JDB0_ORYSJ PP2A2 PP2A2 CYCH1-1 CYCH1-1 CYCD2-3 CYCD2-3 CYCD5-3 CYCD5-3 Q10R90_ORYSJ Q10R90_ORYSJ Q2QMR3_ORYSJ Q2QMR3_ORYSJ CYCD5-2 CYCD5-2 Q2QXF8_ORYSJ Q2QXF8_ORYSJ RBR2 RBR2 Q2R4I6_ORYSJ Q2R4I6_ORYSJ Q2R4Y2_ORYSJ Q2R4Y2_ORYSJ CYCD4-2 CYCD4-2 CYCD7-1 CYCD7-1 Q5QL93_ORYSJ Q5QL93_ORYSJ Q5QMW8_ORYSJ Q5QMW8_ORYSJ Q5SNL8_ORYSJ Q5SNL8_ORYSJ Q5ZA54_ORYSJ Q5ZA54_ORYSJ Q651E6_ORYSJ Q651E6_ORYSJ SKP20 SKP20 Q65XE2_ORYSJ Q65XE2_ORYSJ CYCD1-1 CYCD1-1 Q69M01_ORYSJ Q69M01_ORYSJ CYCD3-1 CYCD3-1 CYCD6-1 CYCD6-1 Q6H4D0_ORYSJ Q6H4D0_ORYSJ Q6H4D4_ORYSJ Q6H4D4_ORYSJ SKP5 SKP5 Q6H5Q3_ORYSJ Q6H5Q3_ORYSJ Q6H5Q8_ORYSJ Q6H5Q8_ORYSJ Q6K4K9_ORYSJ Q6K4K9_ORYSJ SKP1 SKP1 CYCD4-1 CYCD4-1 Q6Z8A9_ORYSJ Q6Z8A9_ORYSJ Q6ZDJ1_ORYSJ Q6ZDJ1_ORYSJ Q7G6D8_ORYSJ Q7G6D8_ORYSJ Q7XAL5_ORYSJ Q7XAL5_ORYSJ Q7XDE0_ORYSJ Q7XDE0_ORYSJ Q7XE44_ORYSJ Q7XE44_ORYSJ RBR1 RBR1 Q84VD5_ORYSJ Q84VD5_ORYSJ Q84VF4_ORYSJ Q84VF4_ORYSJ Q8L561_ORYSJ Q8L561_ORYSJ CYCD1-2 CYCD1-2 Q8H5C3_ORYSJ Q8H5C3_ORYSJ Q8H5C9_ORYSJ Q8H5C9_ORYSJ Q9LWT8_ORYSJ Q9LWT8_ORYSJ Q9FWV0_ORYSJ Q9FWV0_ORYSJ RPS27AA RPS27AA Q8LI49_ORYSJ Q8LI49_ORYSJ Q8LI48_ORYSJ Q8LI48_ORYSJ Q8LI46_ORYSJ Q8LI46_ORYSJ CYCD2-2 CYCD2-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Q8GVW5_ORYSJOs08g0375700 protein; Belongs to the SKP1 family. (169 aa)
A0A0N7KGL3Os03g0152100 protein. (107 aa)
A0A0P0VDK6Os02g0101600 protein; Belongs to the SKP1 family. (161 aa)
A0A0P0VS32Os03g0107000 protein; Belongs to the SKP1 family. (240 aa)
A0A0P0W616Os04g0112200 protein. (480 aa)
A0A0P0WRF1Os06g0111200 protein. (428 aa)
A0A0P0X2H5Os07g0144900 protein. (54 aa)
A0A0P0X908Os07g0625400 protein; Belongs to the SKP1 family. (205 aa)
A0A0P0XN22Os09g0412050 protein; Belongs to the SKP1 family. (168 aa)
A0A0P0YC82Os12g0595600 protein. (164 aa)
A3BMD4_ORYSJOs07g0625600 protein; Belongs to the SKP1 family. (178 aa)
PP2A4Serine/threonine-protein phosphatase PP2A-4 catalytic subunit; Belongs to the PPP phosphatase family. PP-2A subfamily. (314 aa)
RPS27ABUbiquitin-40S ribosomal protein S27a-2; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] (155 aa)
PP2A1Serine/threonine-protein phosphatase PP2A-1 catalytic subunit; Belongs to the PPP phosphatase family. PP-2A subfamily. (306 aa)
CYCD5-1Cyclin-D5-1; Belongs to the cyclin family. Cyclin D subfamily. (367 aa)
PP2A3Serine/threonine-protein phosphatase PP2A-3 catalytic subunit. (307 aa)
CYCD2-1Cyclin-D2-1; Belongs to the cyclin family. Cyclin D subfamily. (308 aa)
CYCD3-2Cyclin-D3-2; Belongs to the cyclin family. Cyclin D subfamily. (364 aa)
Q0JDB0_ORYSJcDNA clone:J013113N12, full insert sequence. (319 aa)
PP2A2Serine/threonine-protein phosphatase PP2A-2 catalytic subunit; Belongs to the PPP phosphatase family. PP-2A subfamily. (307 aa)
CYCH1-1Cyclin-H1-1; Involved in cell cycle regulation. May be a regulatory subunit of CDKD-1/CAK-R2. (330 aa)
CYCD2-3Putative cyclin-D2-3; Belongs to the cyclin family. Cyclin D subfamily. (405 aa)
CYCD5-3Cyclin-D5-3; Belongs to the cyclin family. Cyclin D subfamily. (345 aa)
Q10R90_ORYSJSerine/threonine-protein phosphatase. (314 aa)
Q2QMR3_ORYSJSkp1 family, dimerisation domain containing protein, expressed. (157 aa)
CYCD5-2Cyclin-D5-2; Belongs to the cyclin family. Cyclin D subfamily. (365 aa)
Q2QXF8_ORYSJTranscription factor E2F/dimerisation partner family protein, expressed. (446 aa)
RBR2Retinoblastoma-related protein 2; Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity). (978 aa)
Q2R4I6_ORYSJCDK-activating kinase assembly factor MAT1 family protein, expressed. (195 aa)
Q2R4Y2_ORYSJcDNA clone:006-202-E04, full insert sequence. (190 aa)
CYCD4-2Cyclin-D4-2; Belongs to the cyclin family. Cyclin D subfamily. (383 aa)
CYCD7-1Putative cyclin-D7-1; Belongs to the cyclin family. Cyclin D subfamily. (320 aa)
Q5QL93_ORYSJcDNA clone:J013161I16, full insert sequence. (475 aa)
Q5QMW8_ORYSJcDNA clone:J023064M06, full insert sequence. (1183 aa)
Q5SNL8_ORYSJcDNA clone:J033143J20, full insert sequence. (195 aa)
Q5ZA54_ORYSJOs06g0298400 protein. (860 aa)
Q651E6_ORYSJcDNA, clone: J090082D24, full insert sequence. (210 aa)
SKP20SKP1-like protein 20; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, a RING-box and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1; Belongs to the SKP1 family. (175 aa)
Q65XE2_ORYSJcDNA clone:J023044K03, full insert sequence. (488 aa)
CYCD1-1Cyclin-D1-1; Belongs to the cyclin family. Cyclin D subfamily. (363 aa)
Q69M01_ORYSJOs02g0191700 protein. (552 aa)
CYCD3-1Cyclin-D3-1. (342 aa)
CYCD6-1Cyclin-D6-1; Belongs to the cyclin family. Cyclin D subfamily. (320 aa)
Q6H4D0_ORYSJcDNA clone:J023074H10, full insert sequence; Belongs to the SKP1 family. (160 aa)
Q6H4D4_ORYSJOs09g0274800 protein; Belongs to the SKP1 family. (172 aa)
SKP5SKP1-like protein 5; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, a RING-box and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1; Belongs to the SKP1 family. (165 aa)
Q6H5Q3_ORYSJOs09g0274400 protein; Belongs to the SKP1 family. (167 aa)
Q6H5Q8_ORYSJcDNA clone:002-135-C08, full insert sequence; Belongs to the SKP1 family. (167 aa)
Q6K4K9_ORYSJcDNA clone:J023031G02, full insert sequence. (587 aa)
SKP1SKP1-like protein 1; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, a RING-box and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1. (173 aa)
CYCD4-1Cyclin-D4-1; Belongs to the cyclin family. Cyclin D subfamily. (356 aa)
Q6Z8A9_ORYSJOs02g0225100 protein. (198 aa)
Q6ZDJ1_ORYSJOs08g0375500 protein; Belongs to the SKP1 family. (169 aa)
Q7G6D8_ORYSJOs10g0155200 protein. (117 aa)
Q7XAL5_ORYSJcDNA clone:J033085C17, full insert sequence; Belongs to the SKP1 family. (190 aa)
Q7XDE0_ORYSJcDNA clone:J013116N14, full insert sequence. (541 aa)
Q7XE44_ORYSJSkp1 family, dimerisation domain containing protein; Belongs to the SKP1 family. (220 aa)
RBR1Retinoblastoma-related protein 1; Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity); Belongs to the retinoblastoma protein (RB) family. (1010 aa)
Q84VD5_ORYSJTranscription factor E2F/dimerisation partner family protein, expressed; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family. (346 aa)
Q84VF4_ORYSJOs01g0678700 protein; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family. (294 aa)
Q8L561_ORYSJOs07g0624900 protein; Belongs to the SKP1 family. (200 aa)
CYCD1-2Cyclin-D1-2; Belongs to the cyclin family. Cyclin D subfamily. (354 aa)
Q8H5C3_ORYSJOs07g0145300 protein; Belongs to the SKP1 family. (164 aa)
Q8H5C9_ORYSJOs07g0144800 protein; Belongs to the SKP1 family. (157 aa)
Q9LWT8_ORYSJOs06g0113800 protein; Belongs to the SKP1 family. (166 aa)
Q9FWV0_ORYSJUbiquitin fusion protein, putative, expressed. (147 aa)
RPS27AAUbiquitin-40S ribosomal protein S27a-1; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] (155 aa)
Q8LI49_ORYSJOs07g0625200 protein; Belongs to the SKP1 family. (221 aa)
Q8LI48_ORYSJOs07g0625300 protein; Belongs to the SKP1 family. (277 aa)
Q8LI46_ORYSJcDNA clone:002-113-F08, full insert sequence; Belongs to the SKP1 family. (174 aa)
CYCD2-2Cyclin-D2-2; Belongs to the cyclin family. Cyclin D subfamily. (356 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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