STRINGSTRING
Q9FWV0_ORYSJ Q9FWV0_ORYSJ RPS27AA RPS27AA Q8L4B1_ORYSJ Q8L4B1_ORYSJ Q7XDE1_ORYSJ Q7XDE1_ORYSJ Q6Z743_ORYSJ Q6Z743_ORYSJ RACK1B RACK1B SPPL5 SPPL5 SPPL3 SPPL3 Q5JN39_ORYSJ Q5JN39_ORYSJ SPPL2 SPPL2 SPPL4 SPPL4 RPS27AB RPS27AB RACK1A RACK1A C7J054_ORYSJ C7J054_ORYSJ A0A0P0XU08 A0A0P0XU08 A0A0P0VFA1 A0A0P0VFA1 A0A0P0V1R2 A0A0P0V1R2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Q9FWV0_ORYSJUbiquitin fusion protein, putative, expressed. (147 aa)
RPS27AAUbiquitin-40S ribosomal protein S27a-1; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] (155 aa)
Q8L4B1_ORYSJcDNA clone:001-115-F02, full insert sequence. (419 aa)
Q7XDE1_ORYSJcDNA clone:002-174-D09, full insert sequence. (399 aa)
Q6Z743_ORYSJcDNA clone:J013002C12, full insert sequence. (671 aa)
RACK1BGuanine nucleotide-binding protein subunit beta-like protein B; Component of the RACK1 regulatory proteins that play a role in multiple signal transduction pathways; Belongs to the WD repeat G protein beta family. Ribosomal protein RACK1 subfamily. (336 aa)
SPPL5Signal peptide peptidase-like 5; Intramembrane-cleaving aspartic protease (I-CLiP) that cleaves type II membrane signal peptides in the hydrophobic plane of the membrane; Belongs to the peptidase A22B family. (542 aa)
SPPL3Signal peptide peptidase-like 3; Intramembrane-cleaving aspartic protease (I-CLiP) that cleaves type II membrane signal peptides in the hydrophobic plane of the membrane; Belongs to the peptidase A22B family. (523 aa)
Q5JN39_ORYSJcDNA clone:002-140-B04, full insert sequence. (156 aa)
SPPL2Signal peptide peptidase-like 2; Intramembrane-cleaving aspartic protease (I-CLiP) that cleaves type II membrane signal peptides in the hydrophobic plane of the membrane; Belongs to the peptidase A22B family. (534 aa)
SPPL4Signal peptide peptidase-like 4; Intramembrane-cleaving aspartic protease (I-CLiP) that cleaves type II membrane signal peptides in the hydrophobic plane of the membrane; Belongs to the peptidase A22B family. (545 aa)
RPS27ABUbiquitin-40S ribosomal protein S27a-2; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] (155 aa)
RACK1AGuanine nucleotide-binding protein subunit beta-like protein A; Component of the RACK1 regulatory proteins that functions in innate immunity by interacting with multiple proteins in the RAC1 immune complex. Acts as positive regulator of reactive oxygen species (ROS) production and is required for resistance against rice blast (M.grisea) infection. (334 aa)
C7J054_ORYSJPresenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (459 aa)
A0A0P0XU08Os10g0372500 protein. (429 aa)
A0A0P0VFA1Os02g0173700 protein. (367 aa)
A0A0P0V1R2Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (416 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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