Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| A0A0P0WA41 | Q0D4V4_ORYSJ | A0A0P0WA41 | Q0D4V4 | Os04g0409600 protein. | Os07g0602200 protein. | 0.812 |
| A0A0P0WA41 | Q0D8F2_ORYSJ | A0A0P0WA41 | Q0D8F2 | Os04g0409600 protein. | Os07g0164100 protein. | 0.812 |
| A0A0P0WA41 | Q2QWU2_ORYSJ | A0A0P0WA41 | Q2QWU2 | Os04g0409600 protein. | Histone deacetylase family protein, expressed. | 0.775 |
| A0A0P0WA41 | Q5Z608_ORYSJ | A0A0P0WA41 | Q5Z608 | Os04g0409600 protein. | cDNA clone:J023121P03, full insert sequence. | 0.739 |
| A0A0P0WA41 | Q60DG6_ORYSJ | A0A0P0WA41 | Q60DG6 | Os04g0409600 protein. | Os05g0440300 protein. | 0.565 |
| A0A0P0WA41 | Q60DG7_ORYSJ | A0A0P0WA41 | Q60DG7 | Os04g0409600 protein. | (RAP Annotation release2) Histone deacetylase superfamily protein. | 0.565 |
| A0A0P0XZX1 | Q0D4V4_ORYSJ | A0A0P0XZX1 | Q0D4V4 | Os11g0201400 protein. | Os07g0602200 protein. | 0.639 |
| A0A0P0XZX1 | Q0D8F2_ORYSJ | A0A0P0XZX1 | Q0D8F2 | Os11g0201400 protein. | Os07g0164100 protein. | 0.638 |
| A0A0P0XZX1 | Q2QWU2_ORYSJ | A0A0P0XZX1 | Q2QWU2 | Os11g0201400 protein. | Histone deacetylase family protein, expressed. | 0.646 |
| A0A0P0XZX1 | Q5Z608_ORYSJ | A0A0P0XZX1 | Q5Z608 | Os11g0201400 protein. | cDNA clone:J023121P03, full insert sequence. | 0.541 |
| A0A0P0XZX1 | Q60DG6_ORYSJ | A0A0P0XZX1 | Q60DG6 | Os11g0201400 protein. | Os05g0440300 protein. | 0.640 |
| A0A0P0XZX1 | Q60DG7_ORYSJ | A0A0P0XZX1 | Q60DG7 | Os11g0201400 protein. | (RAP Annotation release2) Histone deacetylase superfamily protein. | 0.638 |
| HDAC1 | HDAC2 | Q7Y0Y8 | Q6YV04 | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (Probable). Regulates negatively the expression of the NAC48/NAC6 gene that controls root growth in seedlings. Epigenetically represses the expression of NAC48/NAC6 by deacetylating 'Lys-9' (H3K9ac), 'Lys-1 [...] | Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.414 |
| HDAC1 | Q0D4V4_ORYSJ | Q7Y0Y8 | Q0D4V4 | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (Probable). Regulates negatively the expression of the NAC48/NAC6 gene that controls root growth in seedlings. Epigenetically represses the expression of NAC48/NAC6 by deacetylating 'Lys-9' (H3K9ac), 'Lys-1 [...] | Os07g0602200 protein. | 0.641 |
| HDAC1 | Q0D8F2_ORYSJ | Q7Y0Y8 | Q0D8F2 | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (Probable). Regulates negatively the expression of the NAC48/NAC6 gene that controls root growth in seedlings. Epigenetically represses the expression of NAC48/NAC6 by deacetylating 'Lys-9' (H3K9ac), 'Lys-1 [...] | Os07g0164100 protein. | 0.645 |
| HDAC1 | Q2QWU2_ORYSJ | Q7Y0Y8 | Q2QWU2 | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (Probable). Regulates negatively the expression of the NAC48/NAC6 gene that controls root growth in seedlings. Epigenetically represses the expression of NAC48/NAC6 by deacetylating 'Lys-9' (H3K9ac), 'Lys-1 [...] | Histone deacetylase family protein, expressed. | 0.651 |
| HDAC1 | Q5Z608_ORYSJ | Q7Y0Y8 | Q5Z608 | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (Probable). Regulates negatively the expression of the NAC48/NAC6 gene that controls root growth in seedlings. Epigenetically represses the expression of NAC48/NAC6 by deacetylating 'Lys-9' (H3K9ac), 'Lys-1 [...] | cDNA clone:J023121P03, full insert sequence. | 0.534 |
| HDAC1 | Q60DG6_ORYSJ | Q7Y0Y8 | Q60DG6 | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (Probable). Regulates negatively the expression of the NAC48/NAC6 gene that controls root growth in seedlings. Epigenetically represses the expression of NAC48/NAC6 by deacetylating 'Lys-9' (H3K9ac), 'Lys-1 [...] | Os05g0440300 protein. | 0.644 |
| HDAC1 | Q60DG7_ORYSJ | Q7Y0Y8 | Q60DG7 | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (Probable). Regulates negatively the expression of the NAC48/NAC6 gene that controls root growth in seedlings. Epigenetically represses the expression of NAC48/NAC6 by deacetylating 'Lys-9' (H3K9ac), 'Lys-1 [...] | (RAP Annotation release2) Histone deacetylase superfamily protein. | 0.640 |
| HDAC2 | HDAC1 | Q6YV04 | Q7Y0Y8 | Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (Probable). Regulates negatively the expression of the NAC48/NAC6 gene that controls root growth in seedlings. Epigenetically represses the expression of NAC48/NAC6 by deacetylating 'Lys-9' (H3K9ac), 'Lys-1 [...] | 0.414 |
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