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REFA1 REFA1 Q655W2_ORYSJ Q655W2_ORYSJ Act Act Q6H703_ORYSJ Q6H703_ORYSJ Q6YUS2_ORYSJ Q6YUS2_ORYSJ SAMDC SAMDC Q75HX0_ORYSJ Q75HX0_ORYSJ ACT1 ACT1 CYP75B3 CYP75B3 Q7X8A1_ORYSJ Q7X8A1_ORYSJ OJ1528D07.7 OJ1528D07.7 ACT2 ACT2 Q7XR79_ORYSJ Q7XR79_ORYSJ H2B1 H2B1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
REFA1Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (447 aa)
Q655W2_ORYSJGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (415 aa)
ActcDNA clone:001-035-C05, full insert sequence. (377 aa)
Q6H703_ORYSJGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (411 aa)
Q6YUS2_ORYSJUbiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
SAMDCS-adenosylmethionine decarboxylase alpha chain; Belongs to the eukaryotic AdoMetDC family. (398 aa)
Q75HX0_ORYSJcDNA clone:J023104C20, full insert sequence. (376 aa)
ACT1Actin-1; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family. (377 aa)
CYP75B3Flavonoid 3'-monooxygenase CYP75B3; Catalyzes the 3'-hydroxylation of the flavonoid B-ring to the 3',4'-hydroxylated state. Catalyzes the 3'- hydroxylation of apigenin to generate luteolin (Probable). Belongs to the cytochrome P450 family. (526 aa)
Q7X8A1_ORYSJGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (402 aa)
OJ1528D07.7Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (444 aa)
ACT2Actin-2; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family. (377 aa)
Q7XR79_ORYSJcDNA clone:002-157-A01, full insert sequence; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
H2B1Histone H2B.1; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (152 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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