STRINGSTRING
Q652J5_ORYSJ Q652J5_ORYSJ UVR3 UVR3 Q10LM1_ORYSJ Q10LM1_ORYSJ CRYD CRYD PHR PHR Q6YXC2_ORYSJ Q6YXC2_ORYSJ PHR2 PHR2 NIP2-1 NIP2-1 OsCRY2 OsCRY2
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
Q652J5_ORYSJOs09g0532700 protein. (695 aa)
UVR3(6-4)DNA photolyase; Involved in repair of UV radiation-induced DNA damage. Catalyzes the photoreactivation of pyrimidine [6-4] pyrimidone photoproduct (6-4 products) (By similarity). (551 aa)
Q10LM1_ORYSJPhotolyase/blue-light receptor PHR2, putative, expressed. (459 aa)
CRYDCryptochrome DASH, chloroplastic/mitochondrial; May have a photoreceptor function. Binds ss- and ds-DNA in a sequence non-specific manner, lacks photolyase activity (By similarity); Belongs to the DNA photolyase class-1 family. (582 aa)
PHRDeoxyribodipyrimidine photo-lyase; Involved in repair of UV radiation-induced DNA damage. Catalyzes the light-dependent monomerization (300-600 nm) of cyclobutylpyrimidine dimers (CPDs), which are formed between adjacent bases on the same DNA strand upon exposure to ultraviolet radiation. Required for plant survival in the presence of UV-B light. Not involved in the repair of (6-4) photoproducts. Belongs to the DNA photolyase class-2 family. (506 aa)
Q6YXC2_ORYSJOs02g0573200 protein. (718 aa)
PHR2Protein PHOSPHATE STARVATION RESPONSE 2; Transcription factor involved in phosphate starvation signaling. Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes. Functionally redundant with PHR1 and PHR3 in regulating Pi starvation response and Pi homeostasis. Involved in both systematic and local Pi-signaling pathways. Regulates several Pi transporters. Regulates the expression of PT2. Directly up-regulates SPX1 and SPX2 expression, but PHR2 binding to DNA is repressed redundantly by SPX1 and S [...] (426 aa)
NIP2-1Aquaporin NIP2-1; Silicon influx transporter responsible for silicon transport from the external solution to the root cells. Is coupled with the silicon efflux transporter LSI2 in both exodermal and endodermal root cells for an efficient silicon transport across the cells into the stele. Silicon is beneficial to plant growth and helps plants to overcome abiotic and biotic stresses by preventing lodging (falling over) and increasing resistance to pests and diseases, as well as other stresses. Is coupled with LSI2 transporter in roots for efficient uptake of arsenite, which is further di [...] (298 aa)
OsCRY2cDNA clone:J013042O16, full insert sequence. (651 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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