STRINGSTRING
Q6ZFJ9_ORYSJ Q6ZFJ9_ORYSJ ACT2 ACT2 REFA1 REFA1 ACT7 ACT7 CUL1 CUL1 Act Act Q6YUS2_ORYSJ Q6YUS2_ORYSJ Q75HX0_ORYSJ Q75HX0_ORYSJ GST GST Q7XR79_ORYSJ Q7XR79_ORYSJ LKHA4 LKHA4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Q6ZFJ9_ORYSJ60 kDa chaperonin beta subunit; Belongs to the chaperonin (HSP60) family. (598 aa)
ACT2Actin-2; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family. (377 aa)
REFA1Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (447 aa)
ACT7Actin-7; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family. (376 aa)
CUL1Cullin-1; Involved in ubiquitination and subsequent proteasomal degradation of target proteins; Belongs to the cullin family. (744 aa)
ActcDNA clone:001-035-C05, full insert sequence. (377 aa)
Q6YUS2_ORYSJUbiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
Q75HX0_ORYSJcDNA clone:J023104C20, full insert sequence. (376 aa)
GSTGlutathione S-transferase, C-terminal domain containing protein, expressed; Belongs to the GST superfamily. (278 aa)
Q7XR79_ORYSJcDNA clone:002-157-A01, full insert sequence; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
LKHA4Leucine aminopeptidase; Aminopeptidase that preferentially cleaves di- and tripeptides. Also has low epoxide hydrolase activity (in vitro). Can hydrolyze the epoxide leukotriene LTA(4) but it forms preferentially 5,6-dihydroxy-7,9,11,14-eicosatetraenoic acid rather than the cytokine leukotriene B(4) as the product compared to the homologous mammalian enzyme (in vitro). (611 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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