STRINGSTRING
APX1 APX1 NRT2.3 NRT2.3 NRT2.1 NRT2.1 GLN1-2 GLN1-2 RPN10 RPN10 PTH1-2 PTH1-2 AT1 AT1 BIP1 BIP1 OJ1212_C06.17 OJ1212_C06.17 WRKY71 WRKY71 ZIP5 ZIP5 BIP3 BIP3 4CL3 4CL3 BZIP50 BZIP50 GDH2 GDH2 MTP8 MTP8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APX1L-ascorbate peroxidase 1, cytosolic; Plays a key role in hydrogen peroxide removal. (250 aa)
NRT2.3High-affinity nitrate transporter 2.3; Involved in nitrate transport, but does not seem to be able to mediate transport by its own. Acts as a dual component transporter with NAR2.1. Imports nitrate with high affinity when expressed with NAR2.1 in a heterologous system (Xenopus oocytes). Plays a key role in long-distance nitrate transport from root to shoot particularly at low external nitrate supply; Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family. (516 aa)
NRT2.1High-affinity nitrate transporter 2.1; Involved in nitrate transport, but does not seem to be able to mediate transport by its own. Acts as a dual component transporter with NAR2.1. Imports nitrate with high affinity when expressed with NAR2.1 in a heterologous system (Xenopus oocytes). (533 aa)
GLN1-2Glutamine synthetase cytosolic isozyme 1-2; High-affinity glutamine synthetase. May play a role in the primary assimilation of ammonium taken up by roots. (357 aa)
RPN1026S proteasome non-ATPase regulatory subunit 4 homolog; Plays a role in maintaining the structural integrity of the 19S regulatory particle (RP), subcomplex of the 26S proteasome. Plays a major role in both the direct and indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP). Binds and presumably selects ubiquitin-conjugates for destruction. Belongs to the proteasome subunit S5A family. (402 aa)
PTH1-2Inorganic phosphate transporter 1-2; Low-affinity transporter for inorganic phosphate (Pi). Involved in internal Pi transport from root to shoot. Responsible for most of the PHR2- mediated accumulation of excess shoot Pi under abundant Pi conditions, but not for PHO2-mediated accumulation of excess shoot Pi. Acts as a H(+):phosphate symporter. (528 aa)
AT1Acyl transferase 1; Involved in defense against pathogens. May contribute to disease resistance by potentiating disease resistance signaling, or producing phytoalexin-like secondary products. (485 aa)
BIP1Heat shock 70 kDa protein BIP1; Key chaperone involved in folding of secretory proteins in the endoplasmic reticulum (ER) lumen (Probable). Involved in ER quality control for seed storage proteins during seed maturation. Functions as a sensor of the ER stress response, and provides suitable conditions for the production of secretory proteins by alleviating ER stress ; Belongs to the heat shock protein 70 family. (665 aa)
OJ1212_C06.17Putative nitric oxide synthase; Produces nitric oxide (NO) which is a messenger molecule involved in hormonal signaling and defense responses in plant. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOA1 subfamily. (547 aa)
WRKY71WRKY transcription factor WRKY71; Transcription repressor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Represses specifically gibberellic acid (GA)-induced promoters in aleurone cells, probably by interfering with GAM1. Regulates, probably indirectly, the activation of defense-related genes such as GF14E during defense response. Modulates plant innate immunity against X.oryzae pv. oryzae (Xoo). Confers resistance to the virulent bacterial pathogen Xoo 13751, probably via the regulation of NPR1 and PR1b defens [...] (348 aa)
ZIP5Zinc transporter 5; Zinc transporter that mediates zinc uptake from the rhizosphere and may be responsible for the translocation of zinc within the plant. (353 aa)
BIP3Heat shock 70 kDa protein BIP3; Functions as chaperone during endoplasmic reticulum (ER) stress response. (669 aa)
4CL3Probable 4-coumarate--CoA ligase 3. (554 aa)
BZIP50bZIP transcription factor 50; Transcription factor involved in endoplasmic reticulum (ER) stress response. Acts downstream of the ER stress sensors IRE1, BZIP39 and BZIP60 to activate BiP chaperone genes. (304 aa)
GDH2Glutamate dehydrogenase 2, mitochondrial; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (411 aa)
MTP8Metal tolerance protein 8; Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily. (316 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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