STRINGSTRING
Q69NX3_ORYSJ Q69NX3_ORYSJ Q0D8J8_ORYSJ Q0D8J8_ORYSJ NCED4 NCED4 PROG1 PROG1 Q69NY4_ORYSJ Q69NY4_ORYSJ ACT1 ACT1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Q69NX3_ORYSJcDNA clone:J033124K14, full insert sequence. (76 aa)
Q0D8J8_ORYSJOs07g0153300 protein. (209 aa)
NCED49-cis-epoxycarotenoid dioxygenase NCED4, chloroplastic; Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids. (582 aa)
PROG1Os07g0153600 protein. (167 aa)
Q69NY4_ORYSJOs07g0153400 protein. (406 aa)
ACT1Actin-1; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family. (377 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.