STRINGSTRING
OJ1528D07.7 OJ1528D07.7 Q7XR79_ORYSJ Q7XR79_ORYSJ Q7X8A1_ORYSJ Q7X8A1_ORYSJ Q75HX0_ORYSJ Q75HX0_ORYSJ COMT COMT Q6YUS2_ORYSJ Q6YUS2_ORYSJ Q6YU78_ORYSJ Q6YU78_ORYSJ Q6H703_ORYSJ Q6H703_ORYSJ Act Act Q655W2_ORYSJ Q655W2_ORYSJ Q10PA9_ORYSJ Q10PA9_ORYSJ REFA1 REFA1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OJ1528D07.7Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (444 aa)
Q7XR79_ORYSJcDNA clone:002-157-A01, full insert sequence; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
Q7X8A1_ORYSJGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (402 aa)
Q75HX0_ORYSJcDNA clone:J023104C20, full insert sequence. (376 aa)
COMTFlavone 3'-O-methyltransferase 1; Methylates OH residues of flavonoid compounds. Can methylate eriodictyol, luteolin, quercetin and taxifolin. Methylates caffeate to produce ferrulate. Catalyzes the methylation of monolignols, the lignin precursors. Functions cooperatively with CAD2 in the culm internodes for the biosynthesis of monolignols. May be involved in lignin biosynthesis in leaves and roots. Involved in syringyl lignin biosynthesis. Can function as 5-hydroxyconiferaldehyde O- methyltransferase in the biosynthetic pathway to syringyl lignin. Involved in melatonin biosynthesis. [...] (368 aa)
Q6YUS2_ORYSJUbiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
Q6YU78_ORYSJSmall nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
Q6H703_ORYSJGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (411 aa)
ActcDNA clone:001-035-C05, full insert sequence. (377 aa)
Q655W2_ORYSJGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (415 aa)
Q10PA9_ORYSJSmall nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
REFA1Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (447 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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