STRINGSTRING
ZIP8 ZIP8 NRT2.4 NRT2.4 AMT3-2 AMT3-2 AMT2-3 AMT2-3 AMT1-1 AMT1-1 NAR2.1 NAR2.1 NIGT1 NIGT1 ZIP6 ZIP6 ZIP7 ZIP7 AMT1-3 AMT1-3 AMT1-2 AMT1-2 AMT3-3 AMT3-3 ZIP10 ZIP10 PHR1 PHR1 ZIP9 ZIP9 GLN1-1 GLN1-1 GLN2 GLN2 GLN1-2 GLN1-2 NRT2.2 NRT2.2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ZIP8Zinc transporter 8; Zinc transporter that may mediate zinc uptake from the rhizosphere and may be responsible for the translocation of zinc within the plant. (390 aa)
NRT2.4Probable high-affinity nitrate transporter 2.4; Involved in nitrate transport; Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family. (485 aa)
AMT3-2Ammonium transporter 3 member 2; Involved in ammonium transport; Belongs to the ammonia transporter channel (TC 1.A.11.2) family. (479 aa)
AMT2-3Ammonium transporter 2 member 3; Involved in ammonium transport; Belongs to the ammonia transporter channel (TC 1.A.11.2) family. (497 aa)
AMT1-1Ammonium transporter 1 member 1; Ammonium transporter probably involved in ammonium uptake from the soil; Belongs to the ammonia transporter channel (TC 1.A.11.2) family. (498 aa)
NAR2.1High-affinity nitrate transporter-activating protein 2.1; Acts as a dual component transporter with NTR2.1, NRT2.2 and NRT2.3. Required for high-affinity nitrate transport. Involved in the regulation of NRT2.1, NRT2.2 and NRT2.3 expression, and in both, HATS (high-affinity transport system) and LATS (low-affinity transport system) activities in plant roots. Imports nitrate with high affinity when expressed with NTR2.1, NTR2.2 or NTR2.3 in a heterologous system (Xenopus oocytes); Belongs to the NAR2 family. (206 aa)
NIGT1Transcription factor NIGT1; Transcriptional repressor that may play a role in response to nitrogen. May be involved in a time-dependent signaling for transcriptional regulation of nitrate-responsive genes. Binds specifically to the DNA sequence motif 5'-GAATC-3' or 5'-GAATATTC-3'. Represses the activity of its own promoter trough binding to these motifs. (412 aa)
ZIP6Zinc transporter 6; Zinc transporter that may be involved in zinc uptake from the rhizosphere; Belongs to the ZIP transporter (TC 2.A.5) family. (395 aa)
ZIP7Zinc transporter 7; Zinc transporter that may be involved in zinc uptake from the rhizosphere. (384 aa)
AMT1-3Ammonium transporter 1 member 3; Ammonium transporter probably involved in ammonium uptake from the soil; Belongs to the ammonia transporter channel (TC 1.A.11.2) family. (498 aa)
AMT1-2Ammonium transporter 1 member 2; Ammonium transporter probably involved in ammonium uptake from the soil and ammonium uptake and retrieval in the vascular system. Belongs to the ammonia transporter channel (TC 1.A.11.2) family. (496 aa)
AMT3-3Ammonium transporter 3 member 3; Involved in ammonium transport; Belongs to the ammonia transporter channel (TC 1.A.11.2) family. (480 aa)
ZIP10Zinc transporter 10; Zinc transporter that may be involved in zinc uptake from the rhizosphere; Belongs to the ZIP transporter (TC 2.A.5) family. (404 aa)
PHR1Protein PHOSPHATE STARVATION RESPONSE 1; Transcription factor involved in phosphate starvation signaling. Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes. Functionally redundant with PHR2 and PHR3 in regulating Pi starvation response and Pi homeostasis. (428 aa)
ZIP9Zinc transporter 9; Zinc transporter that may be involved in zinc uptake from the rhizosphere; Belongs to the ZIP transporter (TC 2.A.5) family. (362 aa)
GLN1-1Glutamine synthetase cytosolic isozyme 1-1; High-affinity glutamine synthetase. May be a major component of the cytosolic glutamine synthetic pathway in leaf blades. (356 aa)
GLN2Glutamine synthetase, chloroplastic; The light-modulated chloroplast enzyme, encoded by a nuclear gene and expressed primarily in leaves, is responsible for the reassimilation of the ammonia generated by photorespiration. Belongs to the glutamine synthetase family. (428 aa)
GLN1-2Glutamine synthetase cytosolic isozyme 1-2; High-affinity glutamine synthetase. May play a role in the primary assimilation of ammonium taken up by roots. (357 aa)
NRT2.2High-affinity nitrate transporter 2.2; Involved in nitrate transport, but does not seem to be able to mediate transport by its own. Acts as a dual component transporter with NAR2.1. Imports nitrate with high affinity when expressed with NAR2.1 in a heterologous system (Xenopus oocytes). (533 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.