STRINGSTRING
HSFA5 HSFA5 HSFB1 HSFB1 HSP18.0 HSP18.0 PR4 PR4 TB1 TB1 CIGR2 CIGR2 OsFAD8 OsFAD8 HSFB2B HSFB2B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HSFA5Heat stress transcription factor A-5; Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE). (475 aa)
HSFB1Heat stress transcription factor B-1; Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE). (302 aa)
HSP18.018.0 kDa class II heat shock protein; Belongs to the small heat shock protein (HSP20) family. (166 aa)
PR4cDNA clone:J023075A19, full insert sequence. (146 aa)
TB1Transcription factor TB1; Probable transcription factor that functions as a negative regulator of lateral branching, presumably through its expression in axillary buds. Involved in the fine tuning of shoot branching. May function as an integrator of multiple signaling pathways to regulate the development of axillary buds. Works partially downstream of strigolactones to inhibit bud outgrowth. Binds to MADS57 to suppress the negative regulation of D14 by MADS57 and balance the expression of D14 for tillering. (388 aa)
CIGR2Chitin-inducible gibberellin-responsive protein 2; May play a regulatory role in the early step of oligosaccharide elicitor response, downstream of the membrane- associated high-affinity chitin-binding protein. Belongs to the GRAS family. (544 aa)
OsFAD8cDNA clone:006-310-E06, full insert sequence. (413 aa)
HSFB2BHeat stress transcription factor B-2b; Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE). (390 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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