STRINGSTRING
CMT2 CMT2 SIZ1 SIZ1 TAF1 TAF1 BBI1 BBI1 CMT3 CMT3 Q8RZU9_ORYSJ Q8RZU9_ORYSJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CMT2DNA (cytosine-5)-methyltransferase CMT2; Involved in CpXpG DNA methylation. (1319 aa)
SIZ1E3 SUMO-protein ligase SIZ1; Probable SUMO E3 ligase that may regulate Pi starvation responses; Belongs to the PIAS family. (875 aa)
TAF1Transcription initiation factor TFIID subunit 1; Largest component and core scaffold of the TFIID basal transcription factor complex. (1810 aa)
BBI1cDNA clone:006-205-F10, full insert sequence. (261 aa)
CMT3DNA (cytosine-5)-methyltransferase CMT3; Involved in CpXpG DNA methylation. Plays a critical role in the maintenance of CpXpG DNA methylation and suppression of a wide spectrum of transposable element (TE) activities. Required for proper plant development in reproductive stage. (907 aa)
Q8RZU9_ORYSJSmall ubiquitin-related modifier. (101 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (16%) [HD]