STRINGSTRING
OJ1754_E06.2 OJ1754_E06.2 A0A0P0VVU6 A0A0P0VVU6 A0A0P0VW53 A0A0P0VW53 A0A0P0W3M9 A0A0P0W3M9 A0A0P0W885 A0A0P0W885 A0A0P0WGU7 A0A0P0WGU7 A0A0P0WNT7 A0A0P0WNT7 A0A0P0WRQ5 A0A0P0WRQ5 A0A0P0WUH0 A0A0P0WUH0 A0A0P0X1A3 A0A0P0X1A3 A0A0P0X1F1 A0A0P0X1F1 A0A0P0XA66 A0A0P0XA66 A0A0P0XEV6 A0A0P0XEV6 A0A0P0XN21 A0A0P0XN21 A0A0P0XPC2 A0A0P0XPC2 A0A0P0XQ57 A0A0P0XQ57 A0A0P0XQG2 A0A0P0XQG2 A0A0P0Y140 A0A0P0Y140 A0A0P0Y2I0 A0A0P0Y2I0 A0A0P0Y5D6 A0A0P0Y5D6 A0A0P0Y792 A0A0P0Y792 Q0D6A3_ORYSJ Q0D6A3_ORYSJ Q0DYZ1_ORYSJ Q0DYZ1_ORYSJ Q0IUL9_ORYSJ Q0IUL9_ORYSJ Q0J5A5_ORYSJ Q0J5A5_ORYSJ Q0JA99_ORYSJ Q0JA99_ORYSJ Q0JD71_ORYSJ Q0JD71_ORYSJ Q7XPZ2_ORYSJ Q7XPZ2_ORYSJ Q7XI22_ORYSJ Q7XI22_ORYSJ B1099D03.10 B1099D03.10 Q7EYS4_ORYSJ Q7EYS4_ORYSJ OsJ_17228 OsJ_17228 EHD3 EHD3 OJ1712_E04.22 OJ1712_E04.22 Q6Z553_ORYSJ Q6Z553_ORYSJ Q6Z441_ORYSJ Q6Z441_ORYSJ OsJ_25070 OsJ_25070 SIZ1 SIZ1 TRX1 TRX1 Q6H591_ORYSJ Q6H591_ORYSJ SIZ2 SIZ2 PTC1 PTC1 OsJ_18575 OsJ_18575 Q5Z6C2_ORYSJ Q5Z6C2_ORYSJ Q5VMF2_ORYSJ Q5VMF2_ORYSJ ORC1 ORC1 Q5NAU4_ORYSJ Q5NAU4_ORYSJ Q5NAU3_ORYSJ Q5NAU3_ORYSJ Q5N7H4_ORYSJ Q5N7H4_ORYSJ Q53KE9_ORYSJ Q53KE9_ORYSJ Q2RA95_ORYSJ Q2RA95_ORYSJ OsJ_33509 OsJ_33509 Q2QVM6_ORYSJ Q2QVM6_ORYSJ Q2QPX3_ORYSJ Q2QPX3_ORYSJ Q2QPI8_ORYSJ Q2QPI8_ORYSJ TTA TTA Q10MN1_ORYSJ Q10MN1_ORYSJ Q10ML5_ORYSJ Q10ML5_ORYSJ Q10CW4_ORYSJ Q10CW4_ORYSJ HACL3_ORYSJ HACL3_ORYSJ Q8W342_ORYSJ Q8W342_ORYSJ Q8LJG8_ORYSJ Q8LJG8_ORYSJ HAZ1 HAZ1 OsJ_23628 OsJ_23628 Q851Q5_ORYSJ Q851Q5_ORYSJ A0A0P0VQ70 A0A0P0VQ70 Q84NP5_ORYSJ Q84NP5_ORYSJ Q84J54_ORYSJ Q84J54_ORYSJ OsJ_14937 OsJ_14937 Q7XT41_ORYSJ Q7XT41_ORYSJ A0A0N7KJ32 A0A0N7KJ32 A0A0P0VB64 A0A0P0VB64 A0A0P0VBB9 A0A0P0VBB9 A0A0P0VDJ3 A0A0P0VDJ3 A0A0P0VE60 A0A0P0VE60 A0A0P0VLI8 A0A0P0VLI8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OJ1754_E06.2PHD finger protein ALFIN-LIKE 3; Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes; Belongs to the Alfin family. (247 aa)
A0A0P0VVU6Os03g0266600 protein. (345 aa)
A0A0P0VW53Os03g0278700 protein. (951 aa)
A0A0P0W3M9Os03g0747600 protein. (765 aa)
A0A0P0W885Os04g0221600 protein. (1077 aa)
A0A0P0WGU7Os04g0691700 protein. (394 aa)
A0A0P0WNT7Os05g0486600 protein. (558 aa)
A0A0P0WRQ5Os06g0102800 protein. (1274 aa)
A0A0P0WUH0Os06g0209300 protein. (516 aa)
A0A0P0X1A3Os06g0731100 protein. (121 aa)
A0A0P0X1F1Os06g0731600 protein. (1069 aa)
A0A0P0XA66Os07g0661550 protein. (207 aa)
A0A0P0XEV6Os08g0336500 protein. (804 aa)
A0A0P0XN21Os09g0434000 protein. (92 aa)
A0A0P0XPC2Os09g0492800 protein. (300 aa)
A0A0P0XQ57Os09g0556700 protein. (527 aa)
A0A0P0XQG2Os09g0530500 protein. (445 aa)
A0A0P0Y140Os11g0292050 protein. (88 aa)
A0A0P0Y2I0Os11g0482500 protein. (961 aa)
A0A0P0Y5D6Os11g0637600 protein. (310 aa)
A0A0P0Y792Os12g0161900 protein. (791 aa)
Q0D6A3_ORYSJOs07g0497100 protein. (306 aa)
Q0DYZ1_ORYSJcDNA clone:J023054K18, full insert sequence. (125 aa)
Q0IUL9_ORYSJOs11g0148700 protein. (997 aa)
Q0J5A5_ORYSJOs08g0451400 protein. (761 aa)
Q0JA99_ORYSJOs04g0609700 protein. (822 aa)
Q0JD71_ORYSJOs04g0425100 protein. (437 aa)
Q7XPZ2_ORYSJcDNA clone:J033122C24, full insert sequence. (629 aa)
Q7XI22_ORYSJOs07g0186400 protein. (218 aa)
B1099D03.10PHD finger protein ALFIN-LIKE 6; Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes. (272 aa)
Q7EYS4_ORYSJOs08g0421900 protein. (216 aa)
OsJ_17228PHD finger protein ALFIN-LIKE 1; Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes; Belongs to the Alfin family. (258 aa)
EHD3PHD finger protein EHD3; Probable transcription factor involved in the regulation of floral induction under long day (LD) conditions. Promotes photoperiodic flowering by repressing GHD7, a major floral repressor. Seems to function independently of HD1. (563 aa)
OJ1712_E04.22PHD finger protein ALFIN-LIKE 7; Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes; Belongs to the Alfin family. (267 aa)
Q6Z553_ORYSJOs08g0414200 protein. (531 aa)
Q6Z441_ORYSJcDNA clone:J013000I05, full insert sequence. (681 aa)
OsJ_25070PHD finger protein ALFIN-LIKE 9; Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes; Belongs to the Alfin family. (278 aa)
SIZ1E3 SUMO-protein ligase SIZ1; Probable SUMO E3 ligase that may regulate Pi starvation responses; Belongs to the PIAS family. (875 aa)
TRX1Histone-lysine N-methyltransferase TRX1; Possesses histone H3 methyltransferase activity in vitro. Methylates 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. Functions as a receptor for the lipid messenger phosphatidylinositol 5-phosphate (PI5P), which regulates negatively its transcriptional activation activity (By similarity). Involved in the regulation of flowering time and floral induction under long day (LD) conditions. Acts as an activator of flowering under LD conditions. May function through binding to EHD3, a r [...] (1022 aa)
Q6H591_ORYSJcDNA clone:001-125-G12, full insert sequence. (216 aa)
SIZ2E3 SUMO-protein ligase SIZ2; Probable SUMO E3 ligase that may regulate Pi starvation responses. (813 aa)
PTC1PHD finger protein PERSISTENT TAPETAL CELL 1; Probable transcriptional activator required for tapetal programmed cell death (PCD) and degeneration, and pollen development in anthers. (679 aa)
OsJ_18575PHD finger protein ALFIN-LIKE 5; Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes. (258 aa)
Q5Z6C2_ORYSJOs06g0529800 protein. (420 aa)
Q5VMF2_ORYSJOs06g0101000 protein. (1025 aa)
ORC1Origin of replication complex subunit 1; Essential protein (By similarity). Component of the origin recognition complex (ORC) that binds origins of replication. It has a role in both chromosomal replication and mating type transcriptional silencing. Binds to the ARS consensus sequence (ACS) of origins of replication (By similarity). H3K4me3 effector that regulates positively the transcription of a subset of genes (By similarity). Required for cell proliferation. (814 aa)
Q5NAU4_ORYSJOs01g0218800 protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (991 aa)
Q5NAU3_ORYSJOs01g0218900 protein. (405 aa)
Q5N7H4_ORYSJOs01g0884500 protein. (892 aa)
Q53KE9_ORYSJcDNA clone:001-124-H10, full insert sequence. (715 aa)
Q2RA95_ORYSJPHD-finger family protein, expressed. (688 aa)
OsJ_33509PHD finger protein ALFIN-LIKE 8; Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes; Belongs to the Alfin family. (254 aa)
Q2QVM6_ORYSJHydroxyproline-rich glycoprotein family protein, putative, expressed. (345 aa)
Q2QPX3_ORYSJOBERON-like protein; Probable transcription factor. (619 aa)
Q2QPI8_ORYSJcDNA clone:J033084A01, full insert sequence. (688 aa)
TTAProtein TITANIA; Probable transcription factor that functions as regulator of metal transporter genes responsible for essential metals delivery to shoots and normal plant growth. Required for the maintenance of metal transporter gene expression, such as IRT1, IRT2, ZIP1, ZIP9, NRAMP1 and NRAMP5. (727 aa)
Q10MN1_ORYSJPHD-finger family protein, expressed. (799 aa)
Q10ML5_ORYSJBRCA1 C Terminus domain containing protein, expressed. (1462 aa)
Q10CW4_ORYSJPHD finger protein ING. (253 aa)
HACL3_ORYSJProbable histone acetyltransferase HAC-like 3; Acetyltransferase enzyme. Acetylates histones, giving a specific tag for transcriptional activation. (1276 aa)
Q8W342_ORYSJPHD-finger family protein, expressed. (697 aa)
Q8LJG8_ORYSJcDNA clone:J033023G11, full insert sequence. (716 aa)
HAZ1Homeobox protein HAZ1; Transcriptional repressor involved in the regulation of gibberrelin (GA) signaling. Binds to the 5'-GATC-3' motif of HD16/EL1 promoter. Functions as a positive regulator of GA signaling by suppressing the expression of HD16/EL1, a negative regulator of GA signaling; Belongs to the PHD-associated homeobox family. (792 aa)
OsJ_23628PHD finger protein ALFIN-LIKE 2; Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes; Belongs to the Alfin family. (244 aa)
Q851Q5_ORYSJcDNA clone:006-212-B02, full insert sequence. (218 aa)
A0A0P0VQ70Os02g0768750 protein. (817 aa)
Q84NP5_ORYSJOs07g0693650 protein. (744 aa)
Q84J54_ORYSJPHD finger protein ING. (253 aa)
OsJ_14937PHD finger protein ALFIN-LIKE 4; Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes; Belongs to the Alfin family. (256 aa)
Q7XT41_ORYSJcDNA clone:002-114-A09, full insert sequence. (124 aa)
A0A0N7KJ32Os04g0433900 protein. (1383 aa)
A0A0P0VB64Os01g0883400 protein. (221 aa)
A0A0P0VBB9Os01g0881000 protein. (1101 aa)
A0A0P0VDJ3Os01g0965500 protein. (316 aa)
A0A0P0VE60Os02g0122700 protein. (291 aa)
A0A0P0VLI8Os02g0611300 protein. (267 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.