STRINGSTRING
Q53Q71_ORYSJ Q53Q71_ORYSJ A0A0P0V857 A0A0P0V857 A0A0P0VFH3 A0A0P0VFH3 A0A0P0VG62 A0A0P0VG62 A0A0P0VG87 A0A0P0VG87 A0A0P0VGT2 A0A0P0VGT2 A0A0P0VZI7 A0A0P0VZI7 A0A0P0VZZ3 A0A0P0VZZ3 A0A0P0WAS3 A0A0P0WAS3 A0A0P0WP82 A0A0P0WP82 Q8H386_ORYSJ Q8H386_ORYSJ CHS2 CHS2 OJ1001_C01.122 OJ1001_C01.122 RFT1 RFT1 Q8W5G9_ORYSJ Q8W5G9_ORYSJ HD3A HD3A Q94D04_ORYSJ Q94D04_ORYSJ HD6 HD6 MFT2 MFT2 GI GI HD3B HD3B A0A0P0UYZ1 A0A0P0UYZ1 A0A0P0V473 A0A0P0V473 PRR37 PRR37 Q0J7W9_ORYSJ Q0J7W9_ORYSJ PIL15 PIL15 PHYA PHYA PHYB PHYB PRR73 PRR73 Q10Q71_ORYSJ Q10Q71_ORYSJ Q2QMN2_ORYSJ Q2QMN2_ORYSJ Q2QP85_ORYSJ Q2QP85_ORYSJ Q2QXL9_ORYSJ Q2QXL9_ORYSJ Q2R2G0_ORYSJ Q2R2G0_ORYSJ ADO3_ORYSJ ADO3_ORYSJ CHS1 CHS1 Q336R6_ORYSJ Q336R6_ORYSJ A0A0P0V4Z5 A0A0P0V4Z5 Q6K9X9_ORYSJ Q6K9X9_ORYSJ Q6YXC2_ORYSJ Q6YXC2_ORYSJ Q6Z1R8_ORYSJ Q6Z1R8_ORYSJ Q5JM56_ORYSJ Q5JM56_ORYSJ Q5QNE3_ORYSJ Q5QNE3_ORYSJ OsJ_22473 OsJ_22473 Q6Z4M0_ORYSJ Q6Z4M0_ORYSJ PPS PPS kr1 kr1 Q7XKJ6_ORYSJ Q7XKJ6_ORYSJ Q7XMR1_ORYSJ Q7XMR1_ORYSJ Q7XQH7_ORYSJ Q7XQH7_ORYSJ Q7XUF1_ORYSJ Q7XUF1_ORYSJ Q7XVG4_ORYSJ Q7XVG4_ORYSJ Q84RS4_ORYSJ Q84RS4_ORYSJ Q84UN8_ORYSJ Q84UN8_ORYSJ OsCRY2 OsCRY2 Q5Z9D9_ORYSJ Q5Z9D9_ORYSJ Q5ZBP8_ORYSJ Q5ZBP8_ORYSJ MTP1 MTP1 ADO2_ORYSJ ADO2_ORYSJ Q65XL7_ORYSJ Q65XL7_ORYSJ ELF3-2 ELF3-2 MFT1 MFT1 Q60ES2_ORYSJ Q60ES2_ORYSJ Q6K9C5_ORYSJ Q6K9C5_ORYSJ A0A0P0WZZ8 A0A0P0WZZ8 A0A0P0XPA0 A0A0P0XPA0 Q6K7P2_ORYSJ Q6K7P2_ORYSJ Q6H878_ORYSJ Q6H878_ORYSJ Q6ESF8_ORYSJ Q6ESF8_ORYSJ APG APG PRR1 PRR1 PRR95 PRR95 A0A0P0XZB5 A0A0P0XZB5 A0A0P0Y182 A0A0P0Y182 A0A0P0Y385 A0A0P0Y385 A0A0P0Y4Z3 A0A0P0Y4Z3 A0A0P0YBW5 A0A0P0YBW5 A0A0P0YCQ4 A0A0P0YCQ4 B9FEC8_ORYSJ B9FEC8_ORYSJ B9GC48_ORYSJ B9GC48_ORYSJ B9GCH5_ORYSJ B9GCH5_ORYSJ C7J9P9_ORYSJ C7J9P9_ORYSJ PCF1 PCF1 A0A0N7KCI6 A0A0N7KCI6 A0A0N7KL34 A0A0N7KL34 A0A0N7KMD3 A0A0N7KMD3 A0A0N7KU73 A0A0N7KU73
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Q53Q71_ORYSJCEN-like protein 2, putative, expressed. (173 aa)
A0A0P0V857Os01g0748800 protein. (90 aa)
A0A0P0VFH3Os02g0178100 protein. (331 aa)
A0A0P0VG62Os02g0203000 protein. (199 aa)
A0A0P0VG87Os02g0202950 protein. (153 aa)
A0A0P0VGT2Os02g0232300 protein. (185 aa)
A0A0P0VZI7Os03g0422702 protein. (126 aa)
A0A0P0VZZ3Os03g0598001 protein. (140 aa)
A0A0P0WAS3Os04g0452100 protein. (179 aa)
A0A0P0WP82Os05g0496300 protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (196 aa)
Q8H386_ORYSJOs07g0114400 protein; Belongs to the protein kinase superfamily. (333 aa)
CHS2Chalcone synthase 2; The primary product of this enzyme is 4,2',4',6'- tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (403 aa)
OJ1001_C01.122Bisdemethoxycurcumin synthase; Plant-specific type III polyketide synthase (PKS) that catalyzes the one-pot formation of the C6-C7-C6 diarylheptanoid scaffold of bisdemethoxycurcumin by the condensation of two molecules of 4-coumaroyl-CoA and one molecule of malonyl-CoA. Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (402 aa)
RFT1Protein RICE FLOWERING LOCUS T 1; Probable mobile flower-promoting signal (florigen) that moves from the leaf to the shoot apical meristem (SAM) and induces flowering. Promotes the transition from vegetative growth to flowering under long day (LD) conditions. Acts upstream of MADS14 and MADS15. May also participate in the promotion of flowering under short day (SD) conditions. (178 aa)
Q8W5G9_ORYSJCasein kinase II, alpha chain, putative, expressed; Belongs to the protein kinase superfamily. (408 aa)
HD3AProtein HEADING DATE 3A; Probable mobile flower-promoting signal (florigen) that moves from the leaf to the shoot apical meristem (SAM) and induces flowering. Promotes the transition from vegetative growth to flowering downstream of HD1 and EHD1 under short day (SD) conditions. Acts upstream of MADS14 and MADS15. Belongs to the phosphatidylethanolamine-binding protein family. (179 aa)
Q94D04_ORYSJOs01g0300900 protein. (624 aa)
HD6Inactive casein kinase II subunit alpha-2; The Nipponbare allele of HD6 contains a premature stop codon, resulting in a truncated non-functional product. (90 aa)
MFT2Protein MOTHER of FT and TFL1 homolog 2; May form complexes with phosphorylated ligands by interfering with kinases and their effectors; Belongs to the phosphatidylethanolamine-binding protein family. (174 aa)
GIProtein GIGANTEA; Involved in regulation of circadian rhythm, and in the control of the photoperiodic flowering. Acts as suppressor of flowering under short-day (SD) and long-day (LD) conditions. Activates Hd1/CONSTANS gene; Belongs to the GIGANTEA family. (1160 aa)
HD3BProtein HEADING DATE 3B; Involved in the regulation of flowering time under short day (SD) and long day (LD) conditions. Functions as floral promoter by negatively regulating GHD7, a repressor of the photoperiodic control of flowering. Acts as floral activator in the LD photoperiodic pathway. Involved in blue light-induced activation of EHD1 expression to promote flowering under SD conditions. (760 aa)
A0A0P0UYZ1Os01g0174000 protein. (347 aa)
A0A0P0V473Os01g0566050 protein. (271 aa)
PRR37Two-component response regulator-like PRR37; Probable transcription factor involved in the regulation of flowering time under long day (LD) conditions. Functions as repressor of flowering. Controls flowering time by negatively regulating the expression of HD3A. Acts downstream of the phytochrome B to repress the expression of EHD1, an activator of the flowering promoter genes HD3A and RFT1. Controls photoperiodic flowering response. Seems to be one of the component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The partic [...] (742 aa)
Q0J7W9_ORYSJOs08g0157600 protein. (719 aa)
PIL15Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15; Transcription factor that may act as negative regulator of phyB-dependent light signal transduction. Belongs to the bHLH protein family. (637 aa)
PHYAPhytochrome A; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reductas [...] (1128 aa)
PHYBPhytochrome B; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reductas [...] (1171 aa)
PRR73Two-component response regulator-like PRR73; Controls photoperiodic flowering response. Seems to be one of the component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The particular coordinated sequential expression of PRR73, PRR37, PRR95, PRR59 and PPR1 result to circadian waves that may be at the basis of the endogenous circadian clock (By similarity). (767 aa)
Q10Q71_ORYSJCasein kinase II, alpha chain, putative, expressed; Belongs to the protein kinase superfamily. (332 aa)
Q2QMN2_ORYSJHelix-loop-helix DNA-binding domain containing protein, expressed. (265 aa)
Q2QP85_ORYSJKelch motif family protein, expressed. (698 aa)
Q2QXL9_ORYSJCENTRORADIALIS, putative, expressed. (173 aa)
Q2R2G0_ORYSJChalcone and stilbene synthases, N-terminal domain containing protein, expressed; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (399 aa)
ADO3_ORYSJAdagio-like protein 3; Component of an E3 ubiquitin ligase complex that plays a central role in blue light-dependent circadian cycles. Acts as a blue light photoreceptor, due to the presence of FMN, that mediates light- regulated protein degradation of critical clock components by targeting them to the proteasome complex. The SCF(ADO3) E3 ubiquitin ligase complex is involved in the regulation of circadian clock-dependent processes including transition to flowering time, hypocotyl elongation, cotyledons and leaf movement rhythms (By similarity). (630 aa)
CHS1Chalcone synthase 1; The primary product of this enzyme is 4,2',4',6'- tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (398 aa)
Q336R6_ORYSJCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (279 aa)
A0A0P0V4Z5Os01g0602600 protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (334 aa)
Q6K9X9_ORYSJOs02g0822800 protein. (519 aa)
Q6YXC2_ORYSJOs02g0573200 protein. (718 aa)
Q6Z1R8_ORYSJOs08g0230300 protein. (448 aa)
Q5JM56_ORYSJcDNA clone:J033076N16, full insert sequence. (628 aa)
Q5QNE3_ORYSJcDNA clone:J023149H16, full insert sequence. (276 aa)
OsJ_22473Adagio-like protein 1; Component of an E3 ubiquitin ligase complex that plays a central role in blue light-dependent circadian cycles. Acts as a blue light photoreceptor, due to the presence of FMN, that mediates light- regulated protein degradation of critical clock components by targeting them to the proteasome complex (By similarity); Belongs to the ADAGIO family. (630 aa)
Q6Z4M0_ORYSJOs07g0526400 protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (399 aa)
PPScDNA clone:J013104O14, full insert sequence. (685 aa)
kr1cDNA clone:J023138D22, full insert sequence. (332 aa)
Q7XKJ6_ORYSJOs04g0526000 protein. (206 aa)
Q7XMR1_ORYSJcDNA clone:J023145I15, full insert sequence; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (393 aa)
Q7XQH7_ORYSJOs04g0497700 protein. (333 aa)
Q7XUF1_ORYSJcDNA clone:J013159E08, full insert sequence. (174 aa)
Q7XVG4_ORYSJcDNA clone:002-169-A07, full insert sequence. (173 aa)
Q84RS4_ORYSJCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (288 aa)
Q84UN8_ORYSJOs08g0361600 protein. (135 aa)
OsCRY2cDNA clone:J013042O16, full insert sequence. (651 aa)
Q5Z9D9_ORYSJOs06g0552900 protein. (173 aa)
Q5ZBP8_ORYSJOs01g0587900 protein. (162 aa)
MTP1Metal tolerance protein 1; Involved in sequestration of excess zinc in the cytoplasm into vacuoles to maintain zinc homeostasis; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily. (418 aa)
ADO2_ORYSJPutative adagio-like protein 2; Component of an E3 ubiquitin ligase complex that plays a central role in blue light-dependent circadian cycles. Acts as a blue light photoreceptor, due to the presence of FMN, that mediates light- regulated protein degradation of critical clock components by targeting them to the proteasome complex (By similarity); Belongs to the ADAGIO family. (635 aa)
Q65XL7_ORYSJOs05g0571000 protein. (1144 aa)
ELF3-2ELF3-like protein 2; Involved in the regulation of flowering time. (742 aa)
MFT1Protein MOTHER of FT and TFL1 homolog 1; May form complexes with phosphorylated ligands by interfering with kinases and their effectors. (176 aa)
Q60ES2_ORYSJcDNA clone:J013090A11, full insert sequence. (440 aa)
Q6K9C5_ORYSJcDNA clone:J023004D12, full insert sequence. (332 aa)
A0A0P0WZZ8Os06g0654900 protein. (81 aa)
A0A0P0XPA0Os09g0513500 protein. (101 aa)
Q6K7P2_ORYSJOs02g0828566 protein. (236 aa)
Q6H878_ORYSJcDNA clone:006-311-F05, full insert sequence. (211 aa)
Q6ESF8_ORYSJcDNA, clone: J100010A16, full insert sequence. (173 aa)
APGTranscription factor APG; Atypical bHLH transcription factor that acts as negative regulator of grain size. Binds the transcription factor ILI6 and forms a heterodimer of antagonistic bHLH transcription factors that regulates grain length and weight by controlling cell elongation in lemma and palea. May be involved in the control of lamina inclination through brassinosteroid signaling pathway. (505 aa)
PRR1Two-component response regulator-like PRR1; Controls photoperiodic flowering response. Seems to be one of the component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The particular coordinated sequential expression of PRR73, PRR37, PRR95, PRR59 and PPR1 result to circadian waves that may be at the basis of the endogenous circadian clock (By similarity). (518 aa)
PRR95Two-component response regulator-like PRR95; Controls photoperiodic flowering response. Seems to be one of the component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The particular coordinated sequential expression of PRR73, PRR37, PRR95, PRR59 and PPR1 result to circadian waves that may be at the basis of the endogenous circadian clock (By similarity). (623 aa)
A0A0P0XZB5Os11g0157600 protein. (697 aa)
A0A0P0Y182Os11g0293800 protein. (190 aa)
A0A0P0Y385Os11g0529125 protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (76 aa)
A0A0P0Y4Z3Os11g0657000 protein. (162 aa)
A0A0P0YBW5Os12g0599000 protein. (146 aa)
A0A0P0YCQ4Os12g0599550 protein. (218 aa)
B9FEC8_ORYSJOs04g0304600 protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (373 aa)
B9GC48_ORYSJOs12g0176050 protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (173 aa)
B9GCH5_ORYSJOs12g0232300 protein. (177 aa)
C7J9P9_ORYSJOs12g0599400 protein. (150 aa)
PCF1Transcription factor PCF1; Transcription activator. Binds the promoter core sequence 5'- GGNCC-3', especially at sites IIa (5'-GGGCCCAC-3') and IIb (5'- GGTCCCAC-3') (essential for meristematic tissue-specificity expression) of the PCNA gene promoter. (183 aa)
A0A0N7KCI6Os01g0202700 protein. (176 aa)
A0A0N7KL34Os05g0518000 protein. (174 aa)
A0A0N7KMD3Os06g0601500 protein. (75 aa)
A0A0N7KU73Os12g0558133 protein. (58 aa)
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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