STRINGSTRING
Spro_0994 Spro_0994 Spro_3209 Spro_3209 aaeB aaeB aaeA aaeA aaeX aaeX tsgA tsgA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spro_0994KEGG: yen:YE0521 hypothetical protein. (161 aa)
Spro_3209KEGG: yen:YE2756 hypothetical protein. (355 aa)
aaeBFusaric acid resistance protein conserved region; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family. (655 aa)
aaeAEfflux transporter, RND family, MFP subunit; Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (311 aa)
aaeXPFAM: protein of unknown function DUF1656; KEGG: stm:STM3366 putative inner membrane protein. (67 aa)
tsgAPFAM: major facilitator superfamily MFS_1; KEGG: yen:YE3963 conserved integral membrane protein. (394 aa)
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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