STRINGSTRING
Spro_1289 Spro_1289 Spro_2731 Spro_2731 Spro_2732 Spro_2732 Spro_2747 Spro_2747 Spro_2836 Spro_2836 Spro_3560 Spro_3560
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spro_1289PFAM: PsiF repeat protein; KEGG: yen:YE2921 putative starvation-inducible protein. (112 aa)
Spro_2731PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: yen:YE2272 hypothetical protein. (644 aa)
Spro_2732PFAM: protein of unknown function DUF444; KEGG: yen:YE2273 hypothetical protein; Belongs to the UPF0229 family. (422 aa)
Spro_2747PFAM: SpoVR family protein; KEGG: ypi:YpsIP31758_1998 SpoVR family protein. (511 aa)
Spro_2836PFAM: Peptidoglycan-binding LysM; transport-associated; SMART: Transport-associated and nodulation region; KEGG: stm:STM2795 hypothetical protein. (148 aa)
Spro_3560PFAM: protein of unknown function DUF1508; KEGG: ypi:YpsIP31758_1209 hypothetical protein. (112 aa)
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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