STRINGSTRING
Spro_2872 Spro_2872 Spro_2873 Spro_2873 Spro_2874 Spro_2874 Spro_2875 Spro_2875 Spro_4139 Spro_4139 Spro_4145 Spro_4145 Spro_4146 Spro_4146 Spro_4147 Spro_4147 Spro_4148 Spro_4148 Spro_4154 Spro_4154 Spro_4155 Spro_4155 Spro_4671 Spro_4671 Spro_4722 Spro_4722 Spro_4723 Spro_4723 Spro_4724 Spro_4724 Spro_4725 Spro_4725
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spro_2872PFAM: Fimbrial protein; KEGG: shm:Shewmr7_3393 fimbrial protein. (181 aa)
Spro_2873PFAM: pili assembly chaperone; KEGG: sec:SC0176 putative fimbrial chaparone. (226 aa)
Spro_2874PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: kpn:KPN_00277 putative fimbrial usher. (840 aa)
Spro_2875PFAM: Fimbrial protein; KEGG: ent:Ent638_1072 fimbrial protein. (355 aa)
Spro_4139PFAM: Fimbrial protein; KEGG: plu:plu0776 MrfG protein. (180 aa)
Spro_4145PFAM: pili assembly chaperone; KEGG: yen:YE0782 pili chaperone protein. (251 aa)
Spro_4146PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: plu:plu0416 hypothetical protein. (846 aa)
Spro_4147PFAM: Fimbrial protein; KEGG: plu:plu0770 MrfB protein. (180 aa)
Spro_4148PFAM: Fimbrial protein; KEGG: ent:Ent638_0401 fimbrial protein. (179 aa)
Spro_4154PFAM: pili assembly chaperone; KEGG: plu:plu0506 hypothetical protein. (231 aa)
Spro_4155PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: plu:plu0505 hypothetical protein. (836 aa)
Spro_4671PFAM: Fimbrial protein; KEGG: yps:YPTB3364 putative mannose-resistant Proteus-like fimbrial protein. (176 aa)
Spro_4722PFAM: pili assembly chaperone; KEGG: yen:YE0782 pili chaperone protein. (252 aa)
Spro_4723PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: plu:plu0416 hypothetical protein. (844 aa)
Spro_4724PFAM: Fimbrial protein; KEGG: plu:plu0770 MrfB protein. (181 aa)
Spro_4725PFAM: Fimbrial protein; KEGG: yen:YE0779 putative mannose-resistant/Proteus-like fimbrial protein. (187 aa)
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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