STRINGSTRING
Spro_1783 Spro_1783 Spro_1784 Spro_1784 Spro_1785 Spro_1785 Spro_1786 Spro_1786 Spro_1787 Spro_1787 Spro_1788 Spro_1788
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spro_1783PFAM: conserved hypothetical protein; KEGG: ent:Ent638_2916 uncharacterised conserved protein UCP028301. (165 aa)
Spro_1784PFAM: protein of unknown function DUF877; KEGG: ent:Ent638_2915 protein of unknown function DUF877. (515 aa)
Spro_1785PFAM: protein of unknown function DUF876; KEGG: kpn:KPN_01324 hypothetical protein. (446 aa)
Spro_1786KEGG: kpn:KPN_01325 hypothetical protein. (229 aa)
Spro_1787PFAM: OmpA/MotB domain protein; KEGG: kpn:KPN_01326 putative outer membrane protein. (569 aa)
Spro_1788PFAM: protein of unknown function DUF796; KEGG: kpn:KPN_01327 hypothetical protein. (163 aa)
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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