STRINGSTRING
Spro_0120 Spro_0120 Spro_0534 Spro_0534 Spro_0577 Spro_0577 Spro_0750 Spro_0750 Spro_1561 Spro_1561 Spro_1562 Spro_1562 Spro_1972 Spro_1972 Spro_2081 Spro_2081 purR purR Spro_2271 Spro_2271 Spro_2679 Spro_2679 Spro_2850 Spro_2850 Spro_3114 Spro_3114 Spro_3197 Spro_3197 Spro_3198 Spro_3198 Spro_3289 Spro_3289 Spro_3401 Spro_3401 Spro_3600 Spro_3600 Spro_4207 Spro_4207 Spro_4465 Spro_4465 Spro_4466 Spro_4466 Spro_4467 Spro_4467 Spro_4573 Spro_4573 Spro_4592 Spro_4592 Spro_4790 Spro_4790
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spro_0120Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pol:Bpro_4573 transcriptional regulator, LacI family. (351 aa)
Spro_0534Transcriptional regulator, LacI family; TIGRFAM: trehalose operon repressor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ypi:YpsIP31758_0432 trehalose operon repressor. (315 aa)
Spro_0577Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ent:Ent638_3187 regulatory protein, LacI. (344 aa)
Spro_0750Transcriptional regulator, LacI family; TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE0661 putative fructose repressor. (334 aa)
Spro_1561PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: yen:YE2817 hypothetical protein. (393 aa)
Spro_1562Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE2816 mgl repressor and galactose ultrainduction factor. (345 aa)
Spro_1972Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ecj:JW3046 DNA-binding transcriptional repressor. (326 aa)
Spro_2081Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_03263 putative bacterial regulatory protein, LacI. (333 aa)
purRTranscriptional regulator, LacI family; Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepressors, hypoxanthine or guanine, thereby effecting transcription repression. (341 aa)
Spro_2271Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE2012 maltose regulon regulatory protein. (352 aa)
Spro_2679Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RSc1014 probable transcriptional regulatory DNA-binding repressor transcription regulator protein. (341 aa)
Spro_2850Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: smd:Smed_4293 periplasmic binding protein/LacI transcriptional regulator. (333 aa)
Spro_3114PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sme:SMb20366 putative transcriptional regulator protein. (350 aa)
Spro_3197Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: mlo:mlr1005 transcriptional regulator. (343 aa)
Spro_3198PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: bch:Bcen2424_5163 aspartyl/asparaginyl beta-hydroxylase. (228 aa)
Spro_3289Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE1364 putative LacI-family transcriptional regulatory protein. (327 aa)
Spro_3401PFAM: aminotransferase class I and II; KEGG: yen:YE1231 putative aminotransferase. (411 aa)
Spro_3600Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ypi:YpsIP31758_0927 sugar-binding transcriptional regulator, LacI family. (360 aa)
Spro_4207Transcriptional regulator, LacI family; KEGG: yen:YE0550A sucrose operon repressor; TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator. (347 aa)
Spro_4465PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: yen:YE3588 putative transporter protein. (460 aa)
Spro_4466KEGG: yen:YE3589 LacI family regulatory protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI. (333 aa)
Spro_4467PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: yen:YE3590 putative hydrolase; Belongs to the IUNH family. (327 aa)
Spro_4573Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: eca:ECA1397 LacI-family transcriptional regulator. (326 aa)
Spro_4592Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ypi:YpsIP31758_3952 sugar-binding transcriptional regulator, LacI family. (327 aa)
Spro_4790Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ypi:YpsIP31758_0115 transcriptional repressor CytR. (342 aa)
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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