STRINGSTRING
Spro_0301 Spro_0301 Spro_0303 Spro_0303 Spro_0305 Spro_0305 Spro_0307 Spro_0307 Spro_0308 Spro_0308 Spro_0309 Spro_0309 Spro_0310 Spro_0310 Spro_0311 Spro_0311 Spro_0320 Spro_0320 Spro_0322 Spro_0322 Spro_0323 Spro_0323 Spro_0324 Spro_0324 Spro_0326 Spro_0326 Spro_0327 Spro_0327 Spro_0331 Spro_0331 Spro_0332 Spro_0332 Spro_0333 Spro_0333 Spro_0334 Spro_0334 Spro_0335 Spro_0335 Spro_0336 Spro_0336 Spro_0337 Spro_0337 Spro_0349 Spro_0349 Spro_0350 Spro_0350 Spro_0352 Spro_0352 Spro_0368 Spro_0368 Spro_0400 Spro_0400 Spro_0401 Spro_0401 Spro_4048 Spro_4048 Spro_4049 Spro_4049 Spro_4050 Spro_4050 Spro_4071 Spro_4071 Spro_4073 Spro_4073 Spro_4074 Spro_4074 Spro_4086 Spro_4086 Spro_4087 Spro_4087 Spro_4088 Spro_4088 Spro_4089 Spro_4089 Spro_4090 Spro_4090 Spro_4091 Spro_4091 Spro_4092 Spro_4092 Spro_4095 Spro_4095 Spro_4096 Spro_4096 Spro_4098 Spro_4098 Spro_4099 Spro_4099 Spro_4100 Spro_4100 Spro_4102 Spro_4102 Spro_4106 Spro_4106 Spro_4109 Spro_4109 Spro_4110 Spro_4110 Spro_4112 Spro_4112 Spro_4114 Spro_4114 Spro_4116 Spro_4116 Spro_4118 Spro_4118 Spro_4161 Spro_4161 Spro_4163 Spro_4163 Spro_4164 Spro_4164 Spro_4169 Spro_4169 Spro_4170 Spro_4170 Spro_4171 Spro_4171 Spro_4172 Spro_4172 Spro_4173 Spro_4173 Spro_4174 Spro_4174 Spro_4175 Spro_4175 Spro_4178 Spro_4178 Spro_4179 Spro_4179 Spro_4180 Spro_4180 Spro_4181 Spro_4181 Spro_4182 Spro_4182 Spro_4183 Spro_4183 Spro_4184 Spro_4184 Spro_4185 Spro_4185
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spro_0301KEGG: eca:ECA0516 hypothetical protein. (308 aa)
Spro_0303KEGG: stt:t4228 hypothetical protein. (578 aa)
Spro_0305KEGG: plu:plu1034 hypothetical protein. (209 aa)
Spro_0307KEGG: plu:plu1035 hypothetical protein. (423 aa)
Spro_0308PFAM: Domain of unknown function DUF1845; KEGG: plu:plu1036 hypothetical protein. (247 aa)
Spro_0309Hypothetical protein. (191 aa)
Spro_0310DNA topoisomerase III; KEGG: plu:plu1037 unnamed protein product; similar to DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein. (679 aa)
Spro_0311KEGG: plu:plu1038 hypothetical protein. (155 aa)
Spro_0320KEGG: pap:PSPA7_4470 type IV B pilus protein. (214 aa)
Spro_0322KEGG: eca:ECA0555 hypothetical protein. (236 aa)
Spro_0323PFAM: Lytic transglycosylase catalytic; KEGG: eca:ECA0556 hypothetical protein. (230 aa)
Spro_0324KEGG: eca:ECA0557 hypothetical protein. (174 aa)
Spro_0326KEGG: eca:ECA0560 putative plasmid transfer protein. (704 aa)
Spro_0327KEGG: eca:ECA0561 hypothetical protein. (252 aa)
Spro_0331KEGG: plu:plu1080 hypothetical protein. (121 aa)
Spro_0332KEGG: eca:ECA0567 hypothetical protein. (121 aa)
Spro_0333KEGG: eca:ECA0568 hypothetical protein. (223 aa)
Spro_0334KEGG: eca:ECA0569 hypothetical protein. (303 aa)
Spro_0335KEGG: eca:ECA0570 hypothetical protein. (498 aa)
Spro_0336KEGG: eca:ECA0572 putative lipoprotein. (141 aa)
Spro_0337KEGG: eca:ECA0573 putative plasmid-related protein. (952 aa)
Spro_0349PFAM: protein of unknown function DUF1527; KEGG: eca:ECA0577 hypothetical protein. (335 aa)
Spro_0350KEGG: eca:ECA0578 hypothetical protein. (494 aa)
Spro_0352KEGG: eca:ECA0580 hypothetical protein. (505 aa)
Spro_0368PFAM: plasmid conserved hypothetical protein RAQPRD; KEGG: eca:ECA0564 hypothetical protein. (203 aa)
Spro_0400Relaxase; PFAM: protein of unknown function DUF1528; Relaxase; KEGG: eca:ECA0613 hypothetical protein. (570 aa)
Spro_0401PFAM: integrase family protein; KEGG: plu:plu1166 hypothetical protein; Belongs to the 'phage' integrase family. (337 aa)
Spro_4048PFAM: integrase family protein; KEGG: eca:ECA0614 putative phage integrase; Belongs to the 'phage' integrase family. (343 aa)
Spro_4049Relaxase; PFAM: protein of unknown function DUF1528; Relaxase; KEGG: eca:ECA0613 hypothetical protein. (560 aa)
Spro_4050KEGG: eca:ECA0611 hypothetical protein. (481 aa)
Spro_4071KEGG: eca:ECA0580 hypothetical protein. (512 aa)
Spro_4073KEGG: eca:ECA0578 hypothetical protein. (493 aa)
Spro_4074PFAM: protein of unknown function DUF1527; KEGG: eca:ECA0577 hypothetical protein. (335 aa)
Spro_4086KEGG: eca:ECA0573 putative plasmid-related protein. (954 aa)
Spro_4087KEGG: eca:ECA0572 putative lipoprotein. (141 aa)
Spro_4088KEGG: eca:ECA0570 hypothetical protein. (498 aa)
Spro_4089KEGG: eca:ECA0569 hypothetical protein. (305 aa)
Spro_4090KEGG: eca:ECA0568 hypothetical protein. (223 aa)
Spro_4091KEGG: eca:ECA0567 hypothetical protein. (121 aa)
Spro_4092KEGG: plu:plu1080 hypothetical protein. (121 aa)
Spro_4095KEGG: eca:ECA0561 hypothetical protein. (252 aa)
Spro_4096KEGG: eca:ECA0560 putative plasmid transfer protein. (730 aa)
Spro_4098KEGG: eca:ECA0557 hypothetical protein. (174 aa)
Spro_4099PFAM: Lytic transglycosylase catalytic; KEGG: eca:ECA0556 hypothetical protein. (230 aa)
Spro_4100KEGG: eca:ECA0555 hypothetical protein. (236 aa)
Spro_4102KEGG: pap:PSPA7_4470 type IV B pilus protein. (206 aa)
Spro_4106KEGG: plu:plu1038 hypothetical protein. (155 aa)
Spro_4109PFAM: Domain of unknown function DUF1845; KEGG: plu:plu1036 hypothetical protein. (253 aa)
Spro_4110KEGG: plu:plu1035 hypothetical protein. (415 aa)
Spro_4112KEGG: plu:plu1034 hypothetical protein. (209 aa)
Spro_4114KEGG: stt:t4228 hypothetical protein. (581 aa)
Spro_4116KEGG: eca:ECA0516 hypothetical protein. (308 aa)
Spro_4118Relaxase; PFAM: protein of unknown function DUF1528; Relaxase; KEGG: plu:plu1165 hypothetical protein. (569 aa)
Spro_4161KEGG: eca:ECA0580 hypothetical protein. (507 aa)
Spro_4163KEGG: eca:ECA0578 hypothetical protein. (494 aa)
Spro_4164PFAM: protein of unknown function DUF1527; KEGG: eca:ECA0577 hypothetical protein. (335 aa)
Spro_4169KEGG: eca:ECA0573 putative plasmid-related protein. (954 aa)
Spro_4170KEGG: eca:ECA0572 putative lipoprotein. (141 aa)
Spro_4171KEGG: eca:ECA0570 hypothetical protein. (498 aa)
Spro_4172KEGG: eca:ECA0569 hypothetical protein. (303 aa)
Spro_4173KEGG: eca:ECA0568 hypothetical protein. (223 aa)
Spro_4174KEGG: eca:ECA0567 hypothetical protein. (121 aa)
Spro_4175KEGG: plu:plu1080 hypothetical protein. (121 aa)
Spro_4178KEGG: eca:ECA0561 hypothetical protein. (252 aa)
Spro_4179KEGG: eca:ECA0560 putative plasmid transfer protein. (704 aa)
Spro_4180PFAM: restriction endonuclease; KEGG: eca:ECA0558 hypothetical protein. (196 aa)
Spro_4181KEGG: eca:ECA0557 hypothetical protein. (174 aa)
Spro_4182PFAM: Lytic transglycosylase catalytic; KEGG: eca:ECA0556 hypothetical protein. (230 aa)
Spro_4183KEGG: eca:ECA0555 hypothetical protein. (236 aa)
Spro_4184KEGG: stt:t4255 hypothetical protein. (251 aa)
Spro_4185KEGG: xac:XAC3619 hypothetical protein. (183 aa)
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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