STRINGSTRING
Spro_1550 Spro_1550 Spro_1551 Spro_1551 Spro_1552 Spro_1552 Spro_1553 Spro_1553 Spro_2348 Spro_2348 Spro_2349 Spro_2349 Spro_2350 Spro_2350 Spro_2351 Spro_2351 Spro_2611 Spro_2611 Spro_2697 Spro_2697 Spro_2698 Spro_2698 Spro_2699 Spro_2699 Spro_2700 Spro_2700 Spro_2701 Spro_2701 Spro_2702 Spro_2702 Spro_2739 Spro_2739 Spro_2740 Spro_2740 Spro_2741 Spro_2741 Spro_2742 Spro_2742 Spro_2853 Spro_2853 Spro_2854 Spro_2854 Spro_2855 Spro_2855 Spro_2856 Spro_2856 Spro_2857 Spro_2857
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spro_1550ABC transporter-related protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: eca:ECA2835 putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (625 aa)
Spro_1551PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA2834 putative ABC transporter periplasmic binding protein. (512 aa)
Spro_1552PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2833 putative ABC transporter permease protein. (306 aa)
Spro_1553PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_1326 binding-protein-dependent transport systems inner membrane component. (302 aa)
Spro_2348PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbo:SBO_1571 putative transport system permease protein. (338 aa)
Spro_2349PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ecs:ECs2089 putative transport protein. (295 aa)
Spro_2350KEGG: ecj:JW1479 D-Ala-D-Ala transporter subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (334 aa)
Spro_2351Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: ecs:ECs2087 putative ATP-binding component of a transport system; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (315 aa)
Spro_2611PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE2110 putative periplasmic murein peptide-binding protein. (544 aa)
Spro_2697Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: yen:YE2229 oligopeptide transport ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (333 aa)
Spro_2698Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: yen:YE2230 oligopeptide transport ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (338 aa)
Spro_2699PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbo:SBO_1822 OppC. (302 aa)
Spro_2700Alkaline phosphatase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2323 oligopeptide transport system permease protein. (306 aa)
Spro_2701PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE2233 periplasmic oligopeptide-binding protein precursor. (545 aa)
Spro_2702PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE2234 periplasmic oligopeptide-binding protein precursor. (545 aa)
Spro_2739ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA1552 ABC transporter ATP-binding protein. (286 aa)
Spro_2740ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA1551 ABC transporter ATP binding protein. (260 aa)
Spro_2741PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA1549 putative ABC transporter substrate-binding protein. (502 aa)
Spro_2742PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1548 putative transport system membrane protein. (572 aa)
Spro_2853Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: kpn:KPN_02023 ATP-binding protein of oligopeptide ABC transport system; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (322 aa)
Spro_2854Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: kpn:KPN_02022 putative ABC transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (328 aa)
Spro_2855PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_02021 oligopeptide ABC transporter, permease protein. (316 aa)
Spro_2856PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_02020 oligopeptide ABC transporter, permease. (322 aa)
Spro_2857PFAM: extracellular solute-binding protein family 5; KEGG: kpn:KPN_02019 putative oligopeptide ABC transporter, oligopeptide-binding protein. (593 aa)
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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