STRINGSTRING
Spro_1425 Spro_1425 Spro_0230 Spro_0230 Spro_0232 Spro_0232 Spro_1045 Spro_1045 Spro_1316 Spro_1316 Spro_1423 Spro_1423 Spro_3953 Spro_3953 Spro_3740 Spro_3740 Spro_3739 Spro_3739 Spro_3201 Spro_3201 Spro_3199 Spro_3199 Spro_2552 Spro_2552 Spro_2550 Spro_2550
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spro_1425ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA2148 putative ABC transport ATP-binding subunit. (232 aa)
Spro_0230PFAM: inner-membrane translocator; KEGG: yen:YE0232 high-affinity branched-chain amino acid transport system, permease protein. (427 aa)
Spro_0232ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE0234 high-affinity branched-chain amino acid transport, ATP-binding protein; Belongs to the ABC transporter superfamily. (233 aa)
Spro_1045Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids. (439 aa)
Spro_1316ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE2903 putative amino acid transporter. (236 aa)
Spro_1423PFAM: inner-membrane translocator; KEGG: yps:YPTB1230 ABC type branched-chain amino acid transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (358 aa)
Spro_3953Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids. (439 aa)
Spro_3740KEGG: yen:YE3239 hypothetical protein. (117 aa)
Spro_3739PFAM: AzlC family protein; KEGG: ypi:YpsIP31758_3198 putative azaleucine resistance protein AzlC. (248 aa)
Spro_3201PFAM: inner-membrane translocator; KEGG: ent:Ent638_2493 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (428 aa)
Spro_3199ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_2495 ABC transporter related. (234 aa)
Spro_2552ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bte:BTH_I0788 branched-chain amino acid ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (237 aa)
Spro_2550PFAM: inner-membrane translocator; KEGG: rso:RSc2439 probable amino-acid transmembrane ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family. (370 aa)
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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