STRINGSTRING
Spro_0053 Spro_0053 Spro_0076 Spro_0076 Spro_0112 Spro_0112 Spro_0233 Spro_0233 Spro_0941 Spro_0941 bioF bioF Spro_1369 Spro_1369 Spro_1440 Spro_1440 hisC hisC Spro_1729 Spro_1729 Spro_1830 Spro_1830 Spro_2017 Spro_2017 Spro_2262 Spro_2262 Spro_2563 Spro_2563 Spro_2789 Spro_2789 Spro_2858 Spro_2858 Spro_3028 Spro_3028 Spro_3088 Spro_3088 Spro_3310 Spro_3310 Spro_3347 Spro_3347 Spro_3401 Spro_3401 Spro_3618 Spro_3618 Spro_3719 Spro_3719 Spro_4067 Spro_4067 Spro_4220 Spro_4220 Spro_4307 Spro_4307 Spro_4445 Spro_4445 kbl kbl
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spro_0053PFAM: aminotransferase class I and II; KEGG: yps:YPTB3907 valine--pyruvate transaminase. (440 aa)
Spro_0076Transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: yen:YE4144 putative transcriptional regulator. (488 aa)
Spro_0112Transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: syf:Synpcc7942_1725 regulatory protein GntR, HTH. (484 aa)
Spro_0233Putative transcriptional regulator, GntR family; PFAM: aminotransferase class I and II; KEGG: eca:ECA4336 putative aminotransferase. (395 aa)
Spro_0941PFAM: aminotransferase class I and II; KEGG: eca:ECA3488 putative aminotransferase. (386 aa)
bioF8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. (383 aa)
Spro_1369PFAM: aminotransferase class I and II; KEGG: bxe:Bxe_A4435 putative aminotransferase. (384 aa)
Spro_1440Transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pfo:Pfl_5531 aminotransferase, class I and II. (482 aa)
hisCTIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: yen:YE2767 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (362 aa)
Spro_1729Aspartate transaminase; PFAM: aminotransferase class I and II; KEGG: yen:YE1561 aspartate aminotransferase. (401 aa)
Spro_1830KEGG: pla:Plav_2905 5-aminolevulinic acid synthase; TIGRFAM: 5-aminolevulinic acid synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aminotransferase class I and II. (403 aa)
Spro_2017PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: oan:Oant_4139 putative transcriptional regulator, GntR family. (505 aa)
Spro_2262PFAM: aminotransferase class I and II; KEGG: yen:YE2010 putative aminotransferase. (393 aa)
Spro_2563PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: aav:Aave_0017 transcriptional regulator, GntR family. (434 aa)
Spro_2789PFAM: aminotransferase class I and II; KEGG: aha:AHA_3110 putative aminotransferase B. (383 aa)
Spro_2858Transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: yen:YE2470 putative GntR-family regulatory protein. (472 aa)
Spro_3028PFAM: aminotransferase class I and II; KEGG: stp:Strop_0458 aminotransferase, class I and II. (407 aa)
Spro_3088Aspartate transaminase; PFAM: aminotransferase class I and II; KEGG: aha:AHA_0624 aromatic-amino-acid aminotransferase. (395 aa)
Spro_3310PFAM: aminotransferase class I and II; KEGG: yen:YE1341 probable aminotransferase. (404 aa)
Spro_3347Transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: yen:YE1303 hypothetical protein. (500 aa)
Spro_3401PFAM: aminotransferase class I and II; KEGG: yen:YE1231 putative aminotransferase. (411 aa)
Spro_3618PFAM: aminotransferase class I and II; KEGG: ypi:YpsIP31758_1857 aminotransferase, classes I and II. (392 aa)
Spro_3719PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: yen:YE0931 putative GntR-family transcriptional regulatory protein. (476 aa)
Spro_4067PFAM: aminotransferase class I and II; KEGG: bha:BH1695 aspartate aminotransferase. (457 aa)
Spro_4220PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pap:PSPA7_3030 transcriptional regulator, GntR family, with aminotransferase domain. (498 aa)
Spro_4307PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pin:Ping_0569 transcriptional regulator (GntR family) with HTH domain. (488 aa)
Spro_4445Aromatic-amino-acid transaminase; PFAM: aminotransferase class I and II; KEGG: yps:YPTB0377 aspartate aminotransferase. (397 aa)
kbl2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. (398 aa)
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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