STRINGSTRING
Spro_0066 Spro_0066 Spro_1517 Spro_1517 Spro_1833 Spro_1833 Spro_1848 Spro_1848 Spro_1891 Spro_1891 Spro_2404 Spro_2404 Spro_2443 Spro_2443 Spro_2879 Spro_2879 Spro_2897 Spro_2897 Spro_2900 Spro_2900 rcsA rcsA rcsB rcsB Spro_3340 Spro_3340 Spro_3452 Spro_3452 Spro_3490 Spro_3490 Spro_3589 Spro_3589 Spro_3769 Spro_3769 Spro_3896 Spro_3896 Spro_4119 Spro_4119 Spro_4134 Spro_4134 Spro_4135 Spro_4135 Spro_4150 Spro_4150 Spro_4193 Spro_4193 Spro_4253 Spro_4253 Spro_4621 Spro_4621 malT malT Spro_4679 Spro_4679 Spro_4726 Spro_4726 Spro_4728 Spro_4728 Spro_1041 Spro_1041 Spro_1035 Spro_1035 Spro_0681 Spro_0681 Spro_0618 Spro_0618 Spro_0612 Spro_0612 Spro_0399 Spro_0399 Spro_0213 Spro_0213 Spro_0132 Spro_0132 Spro_0116 Spro_0116 Spro_1508 Spro_1508 Spro_1501 Spro_1501 Spro_1500 Spro_1500 Spro_1286 Spro_1286 Spro_1065 Spro_1065 Spro_1050 Spro_1050
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spro_0066Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: yen:YE1026 LuxR-family transcriptional regulator. (248 aa)
Spro_1517Transcriptional regulator, LuxR family. (196 aa)
Spro_1833Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: bvi:Bcep1808_6456 autoinducer-binding domain protein. (238 aa)
Spro_1848Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; KEGG: yen:YE1831 response regulator protein. (218 aa)
Spro_1891PFAM: regulatory protein LuxR; KEGG: yen:YE1621 putative LuxR-family regulatory protein. (208 aa)
Spro_2404Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; KEGG: gme:Gmet_2158 two component transcriptional regulator, LuxR family. (160 aa)
Spro_2443KEGG: pfl:PFL_2568 sensory box transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (497 aa)
Spro_2879Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; KEGG: aha:AHA_1023 DNA-binding response regulator, LuxR family. (199 aa)
Spro_2897Transcriptional regulator, CadC; PFAM: transcriptional regulator domain protein; KEGG: vvy:VVA0492 hypothetical protein. (299 aa)
Spro_2900Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: eca:ECA2028 nitrate/nitrite response regulator. (216 aa)
rcsATranscriptional regulator, LuxR family; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds to DNA to regulate expression of genes. (209 aa)
rcsBTwo component transcriptional regulator, LuxR family; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions. (216 aa)
Spro_3340Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: plu:plu3179 two-component response regulator. (224 aa)
Spro_3452Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: yen:YE1201 putative two-component system response regulator. (226 aa)
Spro_3490Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: yen:YE1153 nitrate/nitrite response regulator protein NarP. (210 aa)
Spro_3589Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: reh:H16_B0523 response regulator, NarL-family. (210 aa)
Spro_3769Transcriptional regulator, CadC; PFAM: transcriptional regulator domain protein; KEGG: kpn:KPN_00498 transcriptional activator of cad operon. (518 aa)
Spro_3896Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: yps:YPTB3171 putative response regulator CreB family. (231 aa)
Spro_4119Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; KEGG: asa:ASA_P5G023 hypothetical protein. (216 aa)
Spro_4134Transcriptional regulator, CadC; PFAM: transcriptional regulator domain protein; KEGG: eca:ECA0944 hypothetical protein. (267 aa)
Spro_4135Putative transcriptional regulator, CadC; KEGG: yen:YE3563 hypothetical protein. (134 aa)
Spro_4150Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; KEGG: pol:Bpro_4296 two component transcriptional regulator, LuxR family. (229 aa)
Spro_4193PFAM: regulatory protein LuxR; KEGG: yen:YE0514 putative transcriptional regulator. (229 aa)
Spro_4253Putative transcriptional regulator, CadC; KEGG: ypi:YpsIP31758_0951 hypothetical protein. (158 aa)
Spro_4621Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: yen:YE4004 transcriptional regulatory protein. (239 aa)
malTATP-dependent transcriptional regulator, MalT-like, LuxR family; Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto- oligosaccharides. Specifically binds to the promoter region of its target genes, recognizing a short DNA motif called the MalT box. (904 aa)
Spro_4679Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; KEGG: stt:t2311 fimbriae w protein. (203 aa)
Spro_4726Transcriptional regulator, CadC; PFAM: transcriptional regulator domain protein; KEGG: eca:ECA0944 hypothetical protein. (255 aa)
Spro_4728Transcriptional regulator, CadC; PFAM: transcriptional regulator domain protein; KEGG: eca:ECA0944 hypothetical protein. (256 aa)
Spro_1041Two component transcriptional regulator, winged helix family; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ypi:YpsIP31758_3136 phosphate regulon transcriptional regulatory protein PhoB. (229 aa)
Spro_1035Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ent:Ent638_0283 two component transcriptional regulator, winged helix family. (246 aa)
Spro_0681Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: yen:YE0595 aerobic respiration control protein. (238 aa)
Spro_0618Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; KEGG: plu:plu4274 hypothetical protein. (215 aa)
Spro_0612Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; KEGG: plu:plu4288 hypothetical protein. (252 aa)
Spro_0399Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; KEGG: asa:ASA_P5G023 hypothetical protein. (227 aa)
Spro_0213Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR. (250 aa)
Spro_0132Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; KEGG: ypi:YpsIP31758_4080 transcriptional regulatory protein UhpA. (196 aa)
Spro_0116PFAM: regulatory protein LuxR; KEGG: ypi:YpsIP31758_0720 transcriptional regulator, LuxR family. (105 aa)
Spro_1508Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_C6809 two component transcriptional regulator, winged helix family. (237 aa)
Spro_1501PFAM: regulatory protein LuxR; KEGG: reh:H16_B1626 response regulator, NarL-family. (209 aa)
Spro_1500Transcriptional regulator, CadC; PFAM: transcriptional regulator domain protein; KEGG: ecp:ECP_4609 hypothetical protein. (279 aa)
Spro_1286Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pfl:PFL_2955 DNA-binding response regulator, LuxR family. (213 aa)
Spro_1065Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; KEGG: stm:STM1387 response regulator. (206 aa)
Spro_1050Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; KEGG: gme:Gmet_2158 two component transcriptional regulator, LuxR family. (163 aa)
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.