STRINGSTRING
Spro_0102 Spro_0102 Spro_0633 Spro_0633 Spro_0679 Spro_0679 Spro_0984 Spro_0984 Spro_1523 Spro_1523 Spro_1839 Spro_1839 Spro_1876 Spro_1876 Spro_1931 Spro_1931 Spro_2238 Spro_2238 Spro_2248 Spro_2248 Spro_2337 Spro_2337 Spro_2833 Spro_2833 Spro_2944 Spro_2944 Spro_3104 Spro_3104 Spro_3337 Spro_3337 Spro_3482 Spro_3482 Spro_4236 Spro_4236 Spro_4687 Spro_4687 Spro_4732 Spro_4732
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spro_0102Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: ypi:YpsIP31758_4098 xylose operon regulatory protein. (392 aa)
Spro_0633Transcriptional regulator, AraC family; TIGRFAM: 4-hydroxyphenylacetate catabolism regulatory protein HpaA; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: kpn:KPN_04781 4-hydroxyphenylacetate catabolism. (298 aa)
Spro_0679Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: yen:YE0593 putative right origin-binding protein. (289 aa)
Spro_0984Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: kpn:KPN_01454 2-phenylethylamine catabolism regulatory protein. (302 aa)
Spro_1523Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sgl:SG0402 right origin-binding protein. (152 aa)
Spro_1839Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; PAS fold-4 domain protein; KEGG: plu:plu2244 hypothetical protein. (281 aa)
Spro_1876Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: ent:Ent638_3166 transcriptional regulator, AraC family. (253 aa)
Spro_1931Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: kpn:KPN_02968 putative helix-turn-helix, AraC type. (118 aa)
Spro_2238Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE1991 putative AraC-family transcriptional regulatory protein. (297 aa)
Spro_2248Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: yen:YE2006 arabinose operon regulatory protein. (305 aa)
Spro_2337Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE1743 putative AraC-family transcriptional regulatory protein. (289 aa)
Spro_2833Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE1753 AraC-family transcriptional regulatory protein. (128 aa)
Spro_2944Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE2527 putative AraC-family transcriptional regulatory protein. (288 aa)
Spro_3104Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: cbe:Cbei_4446 transcriptional regulator, AraC family. (282 aa)
Spro_3337Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE1306 putative AraC-family regulatory protein. (257 aa)
Spro_3482Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sgl:SG1549 putative right origin-binding protein. (140 aa)
Spro_4236Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bte:BTH_I2369 transcriptional regulator, AraC family domain protein. (285 aa)
Spro_4687Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bte:BTH_I2369 transcriptional regulator, AraC family domain protein. (287 aa)
Spro_4732Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: atc:AGR_pAT_203 hypothetical protein. (257 aa)
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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