STRINGSTRING
Spro_0061 Spro_0061 Spro_0099 Spro_0099 Spro_0102 Spro_0102 Spro_0120 Spro_0120 Spro_0228 Spro_0228 Spro_0534 Spro_0534 Spro_0577 Spro_0577 Spro_0750 Spro_0750 Spro_1031 Spro_1031 Spro_1421 Spro_1421 Spro_1562 Spro_1562 Spro_1563 Spro_1563 Spro_1961 Spro_1961 Spro_1964 Spro_1964 Spro_1972 Spro_1972 Spro_2053 Spro_2053 Spro_2081 Spro_2081 purR purR Spro_2245 Spro_2245 Spro_2271 Spro_2271 Spro_2370 Spro_2370 Spro_2395 Spro_2395 Spro_2553 Spro_2553 Spro_2679 Spro_2679 Spro_2850 Spro_2850 Spro_3114 Spro_3114 Spro_3197 Spro_3197 Spro_3203 Spro_3203 Spro_3289 Spro_3289 Spro_3600 Spro_3600 Spro_3616 Spro_3616 Spro_3832 Spro_3832 Spro_3834 Spro_3834 Spro_3931 Spro_3931 Spro_4207 Spro_4207 Spro_4229 Spro_4229 Spro_4283 Spro_4283 lpoA lpoA Spro_4466 Spro_4466 Spro_4573 Spro_4573 Spro_4592 Spro_4592 Spro_4652 Spro_4652 Spro_4693 Spro_4693 Spro_4768 Spro_4768 Spro_4790 Spro_4790 Spro_4896 Spro_4896 Spro_4898 Spro_4898
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spro_0061Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_03911 putative transcriptional regulator. (344 aa)
Spro_0099KEGG: yps:YPTB3890 ABC transporter, periplasmic xylose binding protein; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator. (331 aa)
Spro_0102Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: ypi:YpsIP31758_4098 xylose operon regulatory protein. (392 aa)
Spro_0120Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pol:Bpro_4573 transcriptional regulator, LacI family. (351 aa)
Spro_0228PFAM: Extracellular ligand-binding receptor; KEGG: yen:YE0230 branched-chain amino acid-binding protein. (371 aa)
Spro_0534Transcriptional regulator, LacI family; TIGRFAM: trehalose operon repressor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ypi:YpsIP31758_0432 trehalose operon repressor. (315 aa)
Spro_0577Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ent:Ent638_3187 regulatory protein, LacI. (344 aa)
Spro_0750Transcriptional regulator, LacI family; TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE0661 putative fructose repressor. (334 aa)
Spro_1031PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_04487 D-ribose periplasmic binding protein. (314 aa)
Spro_1421KEGG: ent:Ent638_1988 putative substrate-binding periplasmic transport protein. (422 aa)
Spro_1562Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE2816 mgl repressor and galactose ultrainduction factor. (345 aa)
Spro_1563PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE2815 galactose-binding protein. (330 aa)
Spro_1961PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_00509 putative periplasmic binding protein. (309 aa)
Spro_1964PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: hch:HCH_01166 ABC-type sugar transport system, periplasmic component. (305 aa)
Spro_1972Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ecj:JW3046 DNA-binding transcriptional repressor. (326 aa)
Spro_2053Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; KEGG: kpn:KPN_01795 putative periplasmic binding protein/LacI transcriptional regulator. (345 aa)
Spro_2081Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_03263 putative bacterial regulatory protein, LacI. (333 aa)
purRTranscriptional regulator, LacI family; Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepressors, hypoxanthine or guanine, thereby effecting transcription repression. (341 aa)
Spro_2245Monosaccharide-transporting ATPase; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE2003 L-arabinose-binding periplasmic protein precursor. (327 aa)
Spro_2271Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE2012 maltose regulon regulatory protein. (352 aa)
Spro_2370KEGG: eca:ECA1405 putative exported protein. (357 aa)
Spro_2395PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_00509 putative periplasmic binding protein. (307 aa)
Spro_2553PFAM: Extracellular ligand-binding receptor; KEGG: bam:Bamb_3506 extracellular ligand-binding receptor. (386 aa)
Spro_2679Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RSc1014 probable transcriptional regulatory DNA-binding repressor transcription regulator protein. (341 aa)
Spro_2850Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: smd:Smed_4293 periplasmic binding protein/LacI transcriptional regulator. (333 aa)
Spro_3114PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sme:SMb20366 putative transcriptional regulator protein. (350 aa)
Spro_3197Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: mlo:mlr1005 transcriptional regulator. (343 aa)
Spro_3203PFAM: Extracellular ligand-binding receptor; KEGG: ent:Ent638_2491 extracellular ligand-binding receptor. (372 aa)
Spro_3289Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE1364 putative LacI-family transcriptional regulatory protein. (327 aa)
Spro_3600Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ypi:YpsIP31758_0927 sugar-binding transcriptional regulator, LacI family. (360 aa)
Spro_3616Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ypi:YpsIP31758_1855 sugar-binding transcriptional regulator, LacI family. (345 aa)
Spro_3832Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE3331 galactose operon repressor. (339 aa)
Spro_3834Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: eca:ECA3649 transcriptional repressor of carbon metabolism. (336 aa)
Spro_3931Conserved hypothetical protein; KEGG: pmu:PM1249 unknown. (366 aa)
Spro_4207Transcriptional regulator, LacI family; KEGG: yen:YE0550A sucrose operon repressor; TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator. (347 aa)
Spro_4229PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ecc:c3070 ABC transporter Periplasmic binding protein yphF precursor. (327 aa)
Spro_4283Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: aha:AHA_2344 maltose regulon regulatory protein MalI. (341 aa)
lpoALppC family lipoprotein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). (674 aa)
Spro_4466KEGG: yen:YE3589 LacI family regulatory protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI. (333 aa)
Spro_4573Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: eca:ECA1397 LacI-family transcriptional regulator. (326 aa)
Spro_4592Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ypi:YpsIP31758_3952 sugar-binding transcriptional regulator, LacI family. (327 aa)
Spro_4652Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yps:YPTB3798 gluconate utilization system Gnt-I transcriptional repressor. (343 aa)
Spro_4693KEGG: ypi:YpsIP31758_0364 carbohydrate uptake (CUT2 family) ABC transporter, periplasmic carbohydrate-binding protein. (328 aa)
Spro_4768PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE0141 putative periplasmic protein precursor. (318 aa)
Spro_4790Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ypi:YpsIP31758_0115 transcriptional repressor CytR. (342 aa)
Spro_4896Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE0012A ribose operon repressor. (333 aa)
Spro_4898Monosaccharide-transporting ATPase; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE0011 putative D-ribose-binding periplasmic protein precursor. (296 aa)
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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