STRINGSTRING
Spro_1054 Spro_1054 Spro_1506 Spro_1506 Spro_1520 Spro_1520 Spro_2109 Spro_2109 Spro_2407 Spro_2407 Spro_2873 Spro_2873 Spro_4145 Spro_4145 Spro_4154 Spro_4154 Spro_4674 Spro_4674 Spro_4722 Spro_4722
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spro_1054PFAM: pili assembly chaperone; KEGG: sec:SC0176 putative fimbrial chaparone. (234 aa)
Spro_1506KEGG: kpn:KPN_00295 hypothetical protein. (220 aa)
Spro_1520PFAM: pili assembly chaperone; KEGG: kpn:KPN_02985 probable pilin chaperone. (227 aa)
Spro_2109KEGG: yen:YE1858 putative chaperone protein. (254 aa)
Spro_2407PFAM: pili assembly chaperone; KEGG: bch:Bcen2424_1754 pili assembly chaperone. (234 aa)
Spro_2873PFAM: pili assembly chaperone; KEGG: sec:SC0176 putative fimbrial chaparone. (226 aa)
Spro_4145PFAM: pili assembly chaperone; KEGG: yen:YE0782 pili chaperone protein. (251 aa)
Spro_4154PFAM: pili assembly chaperone; KEGG: plu:plu0506 hypothetical protein. (231 aa)
Spro_4674PFAM: pili assembly chaperone; KEGG: ypi:YpsIP31758_0615 chaperone protein PapD. (250 aa)
Spro_4722PFAM: pili assembly chaperone; KEGG: yen:YE0782 pili chaperone protein. (252 aa)
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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