STRINGSTRING
Spro_4372 Spro_4372 Spro_0072 Spro_0072 Spro_4369 Spro_4369 Spro_3230 Spro_3230 Spro_2253 Spro_2253
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spro_4372Transcriptional antiterminator, BglG; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; M trans-acting positive regulator; PRD domain protein; Helix-turn-helix type 11 domain protein; KEGG: yen:YE3777 putative transcriptional regulator. (638 aa)
Spro_0072TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: yen:YE4148 PTS system, mannitol-specific IIABC component. (639 aa)
Spro_4369TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: yen:YE3761 nitrogen regulatory IIA protein. (153 aa)
Spro_3230TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: yps:YPTB1329 PTS system, fructose-specific II component / phosphocarrier p. (377 aa)
Spro_2253Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: kpn:KPN_04197 putative PTS family enzyme IIA component. (145 aa)
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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