STRINGSTRING
Spro_1053 Spro_1053 Spro_4673 Spro_4673 Spro_4723 Spro_4723 Spro_4155 Spro_4155 Spro_4146 Spro_4146 Spro_2874 Spro_2874 Spro_2406 Spro_2406 Spro_1521 Spro_1521
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spro_1053PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: kpn:KPN_00277 putative fimbrial usher. (837 aa)
Spro_4673PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: aha:AHA_0521 outer membrane usher protein. (828 aa)
Spro_4723PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: plu:plu0416 hypothetical protein. (844 aa)
Spro_4155PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: plu:plu0505 hypothetical protein. (836 aa)
Spro_4146PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: plu:plu0416 hypothetical protein. (846 aa)
Spro_2874PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: kpn:KPN_00277 putative fimbrial usher. (840 aa)
Spro_2406PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bch:Bcen2424_1755 fimbrial biogenesis outer membrane usher protein. (812 aa)
Spro_1521PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: kpn:KPN_02986 outer membrane protein; export and assembly of type 1 fimbriae. (871 aa)
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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