STRINGSTRING
Spro_0477 Spro_0477 Spro_0673 Spro_0673 Spro_0790 Spro_0790 Spro_1028 Spro_1028 Spro_1415 Spro_1415 Spro_1499 Spro_1499 Spro_1507 Spro_1507 Spro_2591 Spro_2591 Spro_2899 Spro_2899 Spro_2982 Spro_2982 Spro_2983 Spro_2983 Spro_4620 Spro_4620 Spro_3895 Spro_3895 Spro_3556 Spro_3556 Spro_3489 Spro_3489 Spro_3451 Spro_3451 Spro_4811 Spro_4811 Spro_3339 Spro_3339 Spro_0080 Spro_0080 Spro_0152 Spro_0152 Spro_0463 Spro_0463
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spro_0477Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: yen:YE0422 two-component system sensor protein. (353 aa)
Spro_0673TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: yen:YE0586 hypothetical protein. (415 aa)
Spro_0790Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: ypm:YP_0304 two-component regulatory protein. (906 aa)
Spro_1028Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: ypi:YpsIP31758_4031 sensory box histidine kinase/response regulator. (870 aa)
Spro_1415PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: yen:YE2573 methyl-accepting chemotaxis protein. (546 aa)
Spro_1499Heavy metal sensor signal transduction histidine kinase; Member of a two-component regulatory system. (474 aa)
Spro_1507Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_0544 periplasmic sensor signal transduction histidine kinase. (488 aa)
Spro_2591Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ypi:YpsIP31758_1825 sensor protein RstB. (434 aa)
Spro_2899Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: eca:ECA2029 nitrate/nitrite sensor kinase. (594 aa)
Spro_2982Methyl-accepting chemotaxis sensory transducer; PFAM: ligand binding Tar domain protein; histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: yen:YE2573 methyl-accepting chemotaxis protein. (541 aa)
Spro_2983Methyl-accepting chemotaxis sensory transducer; PFAM: ligand binding Tar domain protein; histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: yen:YE2575 methyl-accepting chemotaxis protein. (556 aa)
Spro_4620Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: yen:YE4005 osmolarity sensor protein. (459 aa)
Spro_3895Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: yen:YE3383 putative histidine kinase sensor. (472 aa)
Spro_3556Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: yen:YE1105 two-component system, sensor kinase. (460 aa)
Spro_3489Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: eca:ECA1900 nitrate/nitrite sensor protein. (560 aa)
Spro_3451Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: yen:YE1202 putative two-component system sensor kinase. (442 aa)
Spro_4811Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: yen:YE0085 two component sensor kinase. (457 aa)
Spro_3339Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: plu:plu3178 two-component sensor kinase. (472 aa)
Spro_0080PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: yen:YE4139 methyl-accepting chemotaxis protein II. (642 aa)
Spro_0152TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG: ypp:YPDSF_3363 membrane protein. (668 aa)
Spro_0463PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: yen:YE0409 methyl-accepting chemotaxis protein. (517 aa)
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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