STRINGSTRING
glmS glmS Spro_0406 Spro_0406 purA purA pyrI pyrI pyrB pyrB carA carA carB carB Spro_0940 Spro_0940 Spro_1222 Spro_1222 Spro_1549 Spro_1549 Spro_1705 Spro_1705 Spro_1729 Spro_1729 Spro_2020 Spro_2020 Spro_2470 Spro_2470 Spro_2473 Spro_2473 Spro_2541 Spro_2541 Spro_2723 Spro_2723 Spro_2931 Spro_2931 Spro_3095 Spro_3095 Spro_3310 Spro_3310 purF purF Spro_3409 Spro_3409 Spro_3677 Spro_3677 glsA glsA Spro_4067 Spro_4067 Spro_4305 Spro_4305 Spro_4306 Spro_4306 Spro_4344 Spro_4344 Spro_4345 Spro_4345 Spro_4692 Spro_4692 argH argH argG argG Spro_4881 Spro_4881 asnA asnA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
glmSGlucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (609 aa)
Spro_0406TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; KEGG: yen:YE0351 aspartate ammonia-lyase. (478 aa)
purAAdenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (432 aa)
pyrIAspartate carbamoyltransferase, regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase. (154 aa)
pyrBKEGG: yen:YE3766 aspartate carbamoyltransferase catalytic subunit; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (311 aa)
carATIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: yen:YE0621 carbamoyl-phosphate synthase small chain; Belongs to the CarA family. (382 aa)
carBTIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: yen:YE0622 carbamoyl-phosphate synthase large chain; Belongs to the CarB family. (1074 aa)
Spro_0940PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ypi:YpsIP31758_3184 hydrolase, carbon-nitrogen family. (257 aa)
Spro_1222TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: kpn:KPN_00695 asparagine synthetase B. (554 aa)
Spro_1549PFAM: peptidase T2 asparaginase 2; KEGG: eca:ECA0132 L-asparaginase. (315 aa)
Spro_1705TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; KEGG: sdy:SDY_3115 periplasmic L-asparaginase II; Belongs to the asparaginase 1 family. (348 aa)
Spro_1729Aspartate transaminase; PFAM: aminotransferase class I and II; KEGG: yen:YE1561 aspartate aminotransferase. (401 aa)
Spro_2020KEGG: yen:YE1720 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase domain protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (456 aa)
Spro_2470TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: yen:YE3793 succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (483 aa)
Spro_2473PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: kpn:KPN_01492 putative glutamic dehyrogenase-like protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (424 aa)
Spro_2541PFAM: aldehyde dehydrogenase; KEGG: atc:AGR_L_2660 hypothetical protein. (477 aa)
Spro_2723TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase/glutaminase; KEGG: yen:YE2261 L-asparaginase I. (338 aa)
Spro_2931Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. (1323 aa)
Spro_3095TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: acr:Acry_0274 succinic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (491 aa)
Spro_3310PFAM: aminotransferase class I and II; KEGG: yen:YE1341 probable aminotransferase. (404 aa)
purFAmidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (505 aa)
Spro_3409TIGRFAM: aspartate racemase; PFAM: Asp/Glu racemase; KEGG: yen:YE1289 putative aspartate/glutamate racemase. (230 aa)
Spro_3677L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (545 aa)
glsAPFAM: Glutaminase, core; KEGG: ypi:YpsIP31758_0822 glutaminase; Belongs to the glutaminase family. (307 aa)
Spro_4067PFAM: aminotransferase class I and II; KEGG: bha:BH1695 aspartate aminotransferase. (457 aa)
Spro_4305TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: eca:ECA2054 succinate-semialdehyde dehydrogenase [NADP+]; Belongs to the aldehyde dehydrogenase family. (484 aa)
Spro_4306TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: kpn:KPN_03825 putative aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (421 aa)
Spro_4344PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: yen:YE3735 glutamate synthase [NADPH] large chain precursor. (1486 aa)
Spro_4345TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ypi:YpsIP31758_0465 glutamate synthase, small subunit. (472 aa)
Spro_4692Glutamate dehydrogenase (NADP(+)); PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: yen:YE4051 NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (444 aa)
argHTIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: yen:YE0121 putative argininosuccinate lyase. (457 aa)
argGPFAM: argininosuccinate synthase; KEGG: plu:plu4742 argininosuccinate synthase (citrulline-aspartate ligase); Belongs to the argininosuccinate synthase family. Type 1 subfamily. (406 aa)
Spro_4881TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: yen:YE0027 glutamine synthetase. (469 aa)
asnAPFAM: aspartate--ammonia ligase; KEGG: yen:YE0003 aspartate-ammonia ligase. (330 aa)
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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