STRINGSTRING
Spro_0054 Spro_0054 Spro_0148 Spro_0148 Spro_0528 Spro_0528 Spro_0529 Spro_0529 Spro_0575 Spro_0575 Spro_0583 Spro_0583 Spro_0834 Spro_0834 Spro_0835 Spro_0835 Spro_0836 Spro_0836 Spro_1036 Spro_1036 Spro_1049 Spro_1049 Spro_1241 Spro_1241 Spro_1371 Spro_1371 Spro_1387 Spro_1387 Spro_1581 Spro_1581 Spro_1582 Spro_1582 Spro_1855 Spro_1855 Spro_1856 Spro_1856 Spro_1857 Spro_1857 Spro_1858 Spro_1858 Spro_2007 Spro_2007 Spro_2008 Spro_2008 Spro_2082 Spro_2082 Spro_2263 Spro_2263 Spro_2324 Spro_2324 Spro_2500 Spro_2500 Spro_2521 Spro_2521 Spro_2709 Spro_2709 glk glk Spro_3450 Spro_3450 Spro_3598 Spro_3598 Spro_3660 Spro_3660 Spro_4203 Spro_4203 Spro_4205 Spro_4205 Spro_4206 Spro_4206 Spro_4221 Spro_4221 Spro_4222 Spro_4222 Spro_4223 Spro_4223 Spro_4224 Spro_4224 Spro_4276 Spro_4276 Spro_4277 Spro_4277 pgi pgi Spro_4590 Spro_4590 Spro_4591 Spro_4591 Spro_4635 Spro_4635 Spro_4636 Spro_4636 Spro_4643 Spro_4643 glgA glgA glgC glgC glgX glgX glgB glgB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Spro_0054PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: ypi:YpsIP31758_4138 alpha-amylase. (688 aa)
Spro_0148Cellulose synthase (UDP-forming); Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose. (867 aa)
Spro_0528Alpha,alpha-phosphotrehalase; KEGG: yen:YE3773 putative trehalose-6-phosphate hydrolase; TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain. (554 aa)
Spro_0529TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: yen:YE3774 PTS system, trehalose-specific IIBC component. (471 aa)
Spro_0575PFAM: glycoside hydrolase family 1; KEGG: sdy:SDY_2912 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (476 aa)
Spro_0583PFAM: glycosyl transferase family 20; KEGG: pol:Bpro_3918 alpha,alpha-trehalose-phosphate synthase. (215 aa)
Spro_0834TIGRFAM: PTS system, lactose/cellobiose family IIB subunit; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: ypm:YP_2480 PTS system, cellobiose-specific IIB component. (126 aa)
Spro_0835PTS system, lactose/cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. (453 aa)
Spro_0836Beta-glucosidase; PFAM: glycoside hydrolase family 1; KEGG: yen:YE0969 putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 1 family. (461 aa)
Spro_1036PFAM: ROK family protein; KEGG: kpn:KPN_00337 possible NAGC-like transcriptional regulator. (302 aa)
Spro_1049Alpha amylase catalytic region; PFAM: glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: yen:YE3177 putative maltodextrin glucosidase; Belongs to the glycosyl hydrolase 13 family. (607 aa)
Spro_1241TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: yen:YE2967 phosphoglucomutase. (547 aa)
Spro_1371PFAM: glycoside hydrolase family 3 domain protein; KEGG: eca:ECA2790 periplasmic beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (765 aa)
Spro_1387PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: yen:YE1962 alpha-amylase. (496 aa)
Spro_1581TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: yen:YE2778 UTP-glucose-1-phosphate uridylyltransferase. (304 aa)
Spro_1582TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: yen:YE2777 UTP-glucose-1-phosphate uridylyltransferase. (297 aa)
Spro_1855PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: plu:plu2754 PTS system, cellobiose-specific IIB component. (101 aa)
Spro_1856PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: kpn:KPN_04368 putative PEP-dependent phosphotransferase enzyme III. (108 aa)
Spro_1857PFAM: glycoside hydrolase family 4; KEGG: ypi:YpsIP31758_3951 6-phospho-beta-glucosidase. (433 aa)
Spro_1858PTS system, lactose/cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. (453 aa)
Spro_2007PFAM: glycoside hydrolase family 4; KEGG: kpn:KPN_04016 putative glycoside hydrolase, family 4. (461 aa)
Spro_2008TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: kpn:KPN_04015 phosphotransferase system PTS. (519 aa)
Spro_2082Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. (480 aa)
Spro_2263TIGRFAM: PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, maltose and glucose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: yen:YE2011 PTS system, maltose and glucose-specific IIAbc component. (474 aa)
Spro_2324PFAM: glycoside hydrolase family 1; KEGG: eca:ECA0859 beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (470 aa)
Spro_2500PFAM: glycoside hydrolase family 1; KEGG: yen:YE1417 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (478 aa)
Spro_2521PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: pin:Ping_2381 alpha-D-1,4-glucosidase. (556 aa)
Spro_2709TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: eca:ECA2329 UTP--glucose-1-phosphate uridylyltransferase. (305 aa)
glkGlucokinase; KEGG: ecv:APECO1_4149 glucokinase; TIGRFAM: glucokinase; PFAM: Glucokinase; Belongs to the bacterial glucokinase family. (320 aa)
Spro_3450TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: yen:YE1205 PTS system, glucose-specific IIA component. (169 aa)
Spro_3598Alpha-glucosidase; PFAM: glycoside hydrolase family 31; KEGG: ypi:YpsIP31758_0924 glycosyl hydrolase, family 31 protein; Belongs to the glycosyl hydrolase 31 family. (790 aa)
Spro_3660PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: ent:Ent638_3046 phosphotransferase system, EIIC. (455 aa)
Spro_4203PFAM: PfkB domain protein; KEGG: yen:YE0554 fructokinase; Belongs to the carbohydrate kinase PfkB family. (309 aa)
Spro_4205TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: yen:YE0552 PTS system, sucrose-specific IIBC component. (456 aa)
Spro_4206Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. (469 aa)
Spro_4221Beta-glucosidase; PFAM: glycoside hydrolase family 1; KEGG: kpn:KPN_01961 6-phospho-beta-glucosidase A. (467 aa)
Spro_4222PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: vfi:VF0607 PTS system, diacetylchitobiose-specific IIA component. (109 aa)
Spro_4223PTS system, lactose/cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. (439 aa)
Spro_4224PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: eca:ECA4435 pts system, IIb component. (103 aa)
Spro_4276PFAM: glucose-6-phosphate isomerase; Cupin 2 conserved barrel domain protein; KEGG: aha:AHA_2345 glucose-6-phosphate isomerase. (187 aa)
Spro_4277KEGG: pdi:BDI_3293 putative thermophilic glucose-6-phosphate isomerase-like protein. (260 aa)
pgiPFAM: phosphoglucose isomerase (PGI); KEGG: yen:YE3870 glucose-6-phosphate isomerase; Belongs to the GPI family. (548 aa)
Spro_4590PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: plu:plu2756 PTS system, cellobiose-specific IIA component (EIIA-CEL) (cellobiose-permease IIA component) (phosphotransferase enzyme II, A component) (EIII-CEL). (114 aa)
Spro_4591PFAM: glycoside hydrolase family 4; KEGG: ypi:YpsIP31758_3951 6-phospho-beta-glucosidase. (435 aa)
Spro_4635KEGG: yen:YE3992 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77. (696 aa)
Spro_4636Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (801 aa)
Spro_4643Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (815 aa)
glgAGlycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (477 aa)
glgCGlucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (425 aa)
glgXGlycogen debranching enzyme GlgX; Removes maltotriose and maltotetraose chains that are attached by 1,6-alpha-linkage to the limit dextrin main chain, generating a debranched limit dextrin. (661 aa)
glgB1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (728 aa)
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.