STRINGSTRING
SFR39052.1 SFR39052.1 SFR46484.1 SFR46484.1 pyrB pyrB SFR51352.1 SFR51352.1 SFR51367.1 SFR51367.1 SFR31200.1 SFR31200.1 SFR31219.1 SFR31219.1 purA purA SFR52932.1 SFR52932.1 SFR55490.1 SFR55490.1 SFR55479.1 SFR55479.1 SFR55453.1 SFR55453.1 carA carA SFR37689.1 SFR37689.1 SFR37261.1 SFR37261.1 SFR33526.1 SFR33526.1 SFR33361.1 SFR33361.1 SFR32122.1 SFR32122.1 SFR32106.1 SFR32106.1 SFR31837.1 SFR31837.1 SFR37889.1 SFR37889.1 glmS glmS SFR38528.1 SFR38528.1 argH argH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SFR39052.1Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (394 aa)
SFR46484.1Alanine dehydrogenase. (398 aa)
pyrBAspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (309 aa)
SFR51352.1Glutamine synthetase. (728 aa)
SFR51367.1Glutamine synthetase. (337 aa)
SFR31200.1Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (447 aa)
SFR31219.1Carbamoyl-phosphate synthase large subunit. (950 aa)
purAAdenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (423 aa)
SFR52932.1Asparagine synthase (glutamine-hydrolysing). (556 aa)
SFR55490.1Glutamate synthase (NADH) small subunit; Manually curated. (488 aa)
SFR55479.1Glutamate synthase (NADH) large subunit. (1499 aa)
SFR55453.1Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (410 aa)
carACarbamoyl-phosphate synthase small subunit; Belongs to the CarA family. (375 aa)
SFR37689.1Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (450 aa)
SFR37261.1Amidophosphoribosyltransferase. (630 aa)
SFR33526.1L-asparaginase. (343 aa)
SFR33361.1N4-(beta-N-acetylglucosaminyl)-L-asparaginase. (344 aa)
SFR32122.1Aspartate aminotransferase. (395 aa)
SFR32106.1Delta-1-pyrroline-5-carboxylate dehydrogenase. (542 aa)
SFR31837.1Aspartate aminotransferase; Manually curated. (399 aa)
SFR37889.1Carbon-nitrogen hydrolase. (256 aa)
glmSGlucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (615 aa)
SFR38528.1Alanine dehydrogenase. (367 aa)
argHArgininosuccinate lyase. (428 aa)
Your Current Organism:
Robiginitalea myxolifaciens
NCBI taxonomy Id: 400055
Other names: DSM 21019, Flavobacteriaceae bacterium YM6-073, KCTC 22216, MBIC 06409, R. myxolifaciens, Robiginitalea myxolifaciens Manh et al. 2008, strain YM6-073
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