(8 nodes) Type 1 protein exporter network (Pontibacter korlensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AKD04029.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (582 aa)
	AKD03073.1	Xenobiotic-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (579 aa)
	AKD02888.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (594 aa)
	AKD02884.1	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (589 aa)
	AKD02833.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (617 aa)
	AKD02454.1	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (612 aa)
	AKD02002.1	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (606 aa)
	AKD04289.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (731 aa)

Your Current Organism:

Pontibacter korlensis

NCBI taxonomy Id: 400092
Other names: CCTCC AB 206081, NRRL B-51097, P. korlensis, Pontibacter korlensis Zhang et al. 2008, Pontibacter sp. z1, Pontibacter sp. z2, strain X14-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKD02002.1	AKD03073.1	PKOR_01150	PKOR_08000	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xenobiotic-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.606
AKD02002.1	AKD04029.1	PKOR_01150	PKOR_14160	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.635
AKD02002.1	AKD04289.1	PKOR_01150	PKOR_15830	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.650
AKD02454.1	AKD03073.1	PKOR_04125	PKOR_08000	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xenobiotic-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.606
AKD02454.1	AKD04029.1	PKOR_04125	PKOR_14160	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.964
AKD02454.1	AKD04289.1	PKOR_04125	PKOR_15830	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.653
AKD02833.1	AKD03073.1	PKOR_06460	PKOR_08000	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xenobiotic-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.606
AKD02833.1	AKD04029.1	PKOR_06460	PKOR_14160	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.606
AKD02833.1	AKD04289.1	PKOR_06460	PKOR_15830	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.624
AKD02884.1	AKD02888.1	PKOR_06795	PKOR_06815	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
AKD02884.1	AKD03073.1	PKOR_06795	PKOR_08000	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xenobiotic-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.709
AKD02884.1	AKD04029.1	PKOR_06795	PKOR_14160	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.663
AKD02884.1	AKD04289.1	PKOR_06795	PKOR_15830	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.632
AKD02888.1	AKD02884.1	PKOR_06815	PKOR_06795	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
AKD02888.1	AKD03073.1	PKOR_06815	PKOR_08000	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xenobiotic-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.635
AKD02888.1	AKD04029.1	PKOR_06815	PKOR_14160	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.666
AKD02888.1	AKD04289.1	PKOR_06815	PKOR_15830	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.634
AKD03073.1	AKD02002.1	PKOR_08000	PKOR_01150	Xenobiotic-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.606
AKD03073.1	AKD02454.1	PKOR_08000	PKOR_04125	Xenobiotic-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.606
AKD03073.1	AKD02833.1	PKOR_08000	PKOR_06460	Xenobiotic-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.606

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