7 items (Amphimedon queenslandica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1X7UZ07	Uncharacterized protein. (246 aa)
	A0A1X7TM33	WD_REPEATS_REGION domain-containing protein. (375 aa)
	A0A1X7VCH9	WD_REPEATS_REGION domain-containing protein. (328 aa)
	A0A1X7VDS0	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
	A0A1X7VDS6	Nop domain-containing protein. (498 aa)
	A0A1X7VL92	NOP5NT domain-containing protein. (90 aa)
	A0A1X7VLH3	Nop domain-containing protein. (405 aa)

Your Current Organism:

Amphimedon queenslandica

NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1X7TM33	A0A1X7UZ07	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.986
A0A1X7TM33	A0A1X7VDS0	WD_REPEATS_REGION domain-containing protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.979
A0A1X7TM33	A0A1X7VDS6	WD_REPEATS_REGION domain-containing protein.	Nop domain-containing protein.	0.986
A0A1X7TM33	A0A1X7VL92	WD_REPEATS_REGION domain-containing protein.	NOP5NT domain-containing protein.	0.942
A0A1X7TM33	A0A1X7VLH3	WD_REPEATS_REGION domain-containing protein.	Nop domain-containing protein.	0.942
A0A1X7UZ07	A0A1X7TM33	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.986
A0A1X7UZ07	A0A1X7VCH9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.986
A0A1X7UZ07	A0A1X7VDS0	Uncharacterized protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.999
A0A1X7UZ07	A0A1X7VDS6	Uncharacterized protein.	Nop domain-containing protein.	0.999
A0A1X7UZ07	A0A1X7VL92	Uncharacterized protein.	NOP5NT domain-containing protein.	0.996
A0A1X7UZ07	A0A1X7VLH3	Uncharacterized protein.	Nop domain-containing protein.	0.996
A0A1X7VCH9	A0A1X7UZ07	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.986
A0A1X7VCH9	A0A1X7VDS0	WD_REPEATS_REGION domain-containing protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.979
A0A1X7VCH9	A0A1X7VDS6	WD_REPEATS_REGION domain-containing protein.	Nop domain-containing protein.	0.986
A0A1X7VCH9	A0A1X7VL92	WD_REPEATS_REGION domain-containing protein.	NOP5NT domain-containing protein.	0.942
A0A1X7VCH9	A0A1X7VLH3	WD_REPEATS_REGION domain-containing protein.	Nop domain-containing protein.	0.942
A0A1X7VDS0	A0A1X7TM33	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	WD_REPEATS_REGION domain-containing protein.	0.979
A0A1X7VDS0	A0A1X7UZ07	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Uncharacterized protein.	0.999
A0A1X7VDS0	A0A1X7VCH9	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	WD_REPEATS_REGION domain-containing protein.	0.979
A0A1X7VDS0	A0A1X7VDS6	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Nop domain-containing protein.	0.999