31 items (Amphimedon queenslandica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1X7SU36	Uncharacterized protein. (375 aa)
	A0A1X7SQ94	Uncharacterized protein. (85 aa)
	A0A1X7SPH1	Uncharacterized protein. (68 aa)
	A0A1X7SH36	Uncharacterized protein. (116 aa)
	A0A1X7UQ37	Helicase ATP-binding domain-containing protein. (386 aa)
	A0A1X7UQ32	Uncharacterized protein. (500 aa)
	A0A1X7VTE8	Uncharacterized protein. (348 aa)
	A0A1X7VT71	TPT domain-containing protein. (335 aa)
	A0A1X7VMJ7	Uncharacterized protein. (356 aa)
	A0A1X7VLY0	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (184 aa)
	A0A1X7VF89	TPT domain-containing protein. (346 aa)
	A0A1X7VCV4	Uncharacterized protein. (380 aa)
	A0A1X7VBM7	Uncharacterized protein. (338 aa)
	A0A1X7V843	Uncharacterized protein. (489 aa)
	A0A1X7UNF1	ResIII domain-containing protein. (307 aa)
	A0A1X7ULI3	Rhodanese domain-containing protein. (159 aa)
	A0A1X7UKV7	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (303 aa)
	A0A1X7SW93	Uncharacterized protein. (51 aa)
	A0A1X7UK00	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (305 aa)
	A0A1X7UE96	Solute carrier organic anion transporter family member. (669 aa)
	A0A1X7UBY7	Solute carrier organic anion transporter family member. (559 aa)
	A0A1X7UBD9	Solute carrier organic anion transporter family member. (690 aa)
	A0A1X7UB28	Solute carrier organic anion transporter family member. (700 aa)
	A0A1X7T5R5	Uncharacterized protein. (74 aa)
	A0A1X7UP28	Uncharacterized protein. (409 aa)
	A0A1X7V517	Uncharacterized protein. (640 aa)
	A0A1X7V4L4	ARL2_Bind_BART domain-containing protein. (172 aa)
	A0A1X7V3S0	Uncharacterized protein. (95 aa)
	A0A1X7UUY5	Solute carrier organic anion transporter family member. (654 aa)
	A0A1X7UQN8	Uncharacterized protein. (512 aa)
	A0A1X7V6R1	Uncharacterized protein. (497 aa)

Your Current Organism:

Amphimedon queenslandica

NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1X7SH36	A0A1X7VF89	Uncharacterized protein.	TPT domain-containing protein.	0.414
A0A1X7SPH1	A0A1X7VF89	Uncharacterized protein.	TPT domain-containing protein.	0.474
A0A1X7SPH1	A0A1X7VT71	Uncharacterized protein.	TPT domain-containing protein.	0.508
A0A1X7SPH1	A0A1X7VTE8	Uncharacterized protein.	Uncharacterized protein.	0.502
A0A1X7SQ94	A0A1X7VF89	Uncharacterized protein.	TPT domain-containing protein.	0.414
A0A1X7UK00	A0A1X7V4L4	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	ARL2_Bind_BART domain-containing protein.	0.446
A0A1X7UKV7	A0A1X7V4L4	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	ARL2_Bind_BART domain-containing protein.	0.446
A0A1X7V4L4	A0A1X7UK00	ARL2_Bind_BART domain-containing protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.446
A0A1X7V4L4	A0A1X7UKV7	ARL2_Bind_BART domain-containing protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.446
A0A1X7V4L4	A0A1X7VLY0	ARL2_Bind_BART domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.979
A0A1X7VBM7	A0A1X7VF89	Uncharacterized protein.	TPT domain-containing protein.	0.414
A0A1X7VCV4	A0A1X7VF89	Uncharacterized protein.	TPT domain-containing protein.	0.474
A0A1X7VCV4	A0A1X7VT71	Uncharacterized protein.	TPT domain-containing protein.	0.508
A0A1X7VCV4	A0A1X7VTE8	Uncharacterized protein.	Uncharacterized protein.	0.502
A0A1X7VF89	A0A1X7SH36	TPT domain-containing protein.	Uncharacterized protein.	0.414
A0A1X7VF89	A0A1X7SPH1	TPT domain-containing protein.	Uncharacterized protein.	0.474
A0A1X7VF89	A0A1X7SQ94	TPT domain-containing protein.	Uncharacterized protein.	0.414
A0A1X7VF89	A0A1X7VBM7	TPT domain-containing protein.	Uncharacterized protein.	0.414
A0A1X7VF89	A0A1X7VCV4	TPT domain-containing protein.	Uncharacterized protein.	0.474
A0A1X7VF89	A0A1X7VMJ7	TPT domain-containing protein.	Uncharacterized protein.	0.414