STRINGSTRING
BDP_0605 BDP_0605 BDP_0606 BDP_0606 BDP_0607 BDP_0607 livG livG livF livF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BDP_0605Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein. (354 aa)
BDP_0606Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (309 aa)
BDP_0607Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (359 aa)
livGBranched-chain amino acid transport ATP-binding protein livG. (266 aa)
livFBranched-chain amino acid transport ATP-binding protein livF. (234 aa)
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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