STRINGSTRING
BDP_0096 BDP_0096 BDP_0097 BDP_0097 BDP_0098 BDP_0098 BDP_0100 BDP_0100 BDP_0101 BDP_0101
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BDP_0096Branched-chain amino acid ABC transport system permease component; Belongs to the binding-protein-dependent transport system permease family. (469 aa)
BDP_0097Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (327 aa)
BDP_0098Branched-chain amino acid transport system ATP-binding protein. (331 aa)
BDP_0100Branched-chain amino acid transport system substrate-binding protein. (434 aa)
BDP_0101Branched-chain amino acid transporter system substrate-binding protein. (424 aa)
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
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