(50 nodes) Mixed, incl. Xyloglucan endo-transglycosylase, C-terminal, and SAGA-type complex network (Oryza glumipatula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D9Y6E4	Uncharacterized protein. (668 aa)
	A0A0D9YA60	Uncharacterized protein. (113 aa)
	A0A0D9YEN9	Uncharacterized protein. (495 aa)
	A0A0D9YHN1	Uncharacterized protein. (258 aa)
	A0A0D9YJ99	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (138 aa)
	A0A0D9YLT0	Uncharacterized protein. (269 aa)
	A0A0D9YQF4	Uncharacterized protein. (582 aa)
	A0A0D9YU80	Uncharacterized protein. (90 aa)
	A0A0D9YVR4	Uncharacterized protein. (212 aa)
	A0A0D9YXT4	Uncharacterized protein. (584 aa)
	A0A0D9YZ25	PMR5N domain-containing protein. (700 aa)
	A0A0D9Z0Y6	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (310 aa)
	A0A0D9Z1W6	Uncharacterized protein. (895 aa)
	A0A0D9Z3A9	AAI domain-containing protein; Belongs to the plant LTP family. (211 aa)
	A0A0D9ZD78	Transcriptional adapter. (570 aa)
	A0A0D9ZDJ4	Uncharacterized protein. (303 aa)
	A0A0D9ZG34	Uncharacterized protein. (448 aa)
	A0A0D9ZQ90	GH16 domain-containing protein. (416 aa)
	A0A0D9ZQ94	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (283 aa)
	A0A0D9ZQ99	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (294 aa)
	A0A0D9ZQA0	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (320 aa)
	A0A0D9ZQQ3	Uncharacterized protein. (364 aa)
	A0A0D9ZRJ0	Uncharacterized protein. (546 aa)
	A0A0D9ZRK7	Ubiquitinyl hydrolase 1. (562 aa)
	A0A0D9ZUA7	DUF295 domain-containing protein. (368 aa)
	A0A0D9ZXV3	SAGA-associated factor 11. (208 aa)
	A0A0D9ZXV7	RING-type domain-containing protein. (1048 aa)
	A0A0D9ZXZ1	Uncharacterized protein. (141 aa)
	A0A0E0A7Z2	Uncharacterized protein. (546 aa)
	A0A0E0AAM8	DUF295 domain-containing protein. (380 aa)
	A0A0E0ADS7	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (371 aa)
	A0A0E0ADT1	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (310 aa)
	A0A0E0AJ53	DUF295 domain-containing protein. (444 aa)
	A0A0E0AJN5	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (301 aa)
	A0A0E0AMK7	Uncharacterized protein. (425 aa)
	A0A0E0ANH3	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3838 aa)
	A0A0E0AQI2	Uncharacterized protein. (411 aa)
	A0A0E0ASL1	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (290 aa)
	A0A0E0ASP9	Uncharacterized protein. (649 aa)
	A0A0E0AW56	Uncharacterized protein. (222 aa)
	A0A0E0B4Z4	Uncharacterized protein. (392 aa)
	A0A0E0BAJ0	Uncharacterized protein. (460 aa)
	A0A0E0BDC1	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (352 aa)
	A0A0E0BE24	Uncharacterized protein. (529 aa)
	A0A0E0BKU6	Uncharacterized protein. (1326 aa)
	A0A0E0BKU7	Uncharacterized protein. (874 aa)
	A0A0E0BKV2	DUF295 domain-containing protein. (487 aa)
	A0A0E0BRI6	SGF29 C-terminal domain-containing protein. (294 aa)
	A0A0E0BSA7	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (338 aa)
	A0A0E0BUI2	Uncharacterized protein. (373 aa)

Your Current Organism:

Oryza glumipatula

NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9Y6E4	A0A0D9YHN1	Uncharacterized protein.	Uncharacterized protein.	0.660
A0A0D9Y6E4	A0A0D9ZD78	Uncharacterized protein.	Transcriptional adapter.	0.710
A0A0D9Y6E4	A0A0D9ZRK7	Uncharacterized protein.	Ubiquitinyl hydrolase 1.	0.671
A0A0D9Y6E4	A0A0D9ZXV3	Uncharacterized protein.	SAGA-associated factor 11.	0.803
A0A0D9Y6E4	A0A0D9ZXV7	Uncharacterized protein.	RING-type domain-containing protein.	0.693
A0A0D9Y6E4	A0A0E0AMK7	Uncharacterized protein.	Uncharacterized protein.	0.682
A0A0D9Y6E4	A0A0E0ANH3	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.708
A0A0D9Y6E4	A0A0E0BAJ0	Uncharacterized protein.	Uncharacterized protein.	0.726
A0A0D9Y6E4	A0A0E0BRI6	Uncharacterized protein.	SGF29 C-terminal domain-containing protein.	0.693
A0A0D9YA60	A0A0D9YHN1	Uncharacterized protein.	Uncharacterized protein.	0.480
A0A0D9YA60	A0A0D9YJ99	Uncharacterized protein.	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	0.514
A0A0D9YA60	A0A0D9ZD78	Uncharacterized protein.	Transcriptional adapter.	0.407
A0A0D9YA60	A0A0D9ZG34	Uncharacterized protein.	Uncharacterized protein.	0.402
A0A0D9YA60	A0A0D9ZRK7	Uncharacterized protein.	Ubiquitinyl hydrolase 1.	0.512
A0A0D9YA60	A0A0D9ZXV7	Uncharacterized protein.	RING-type domain-containing protein.	0.407
A0A0D9YA60	A0A0E0AMK7	Uncharacterized protein.	Uncharacterized protein.	0.513
A0A0D9YA60	A0A0E0ANH3	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.525
A0A0D9YA60	A0A0E0BAJ0	Uncharacterized protein.	Uncharacterized protein.	0.577
A0A0D9YA60	A0A0E0BRI6	Uncharacterized protein.	SGF29 C-terminal domain-containing protein.	0.407
A0A0D9YEN9	A0A0D9YHN1	Uncharacterized protein.	Uncharacterized protein.	0.660