(16 nodes) Small ribosomal subunit, and Ribosomal protein L6e network (Oryza glumipatula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D9Y7Q5	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (204 aa)
	A0A0D9YN11	PUA domain-containing protein. (464 aa)
	A0A0D9YPL7	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (138 aa)
	A0A0D9YRD4	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (81 aa)
	A0A0D9YSE9	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (220 aa)
	A0A0D9Z9G7	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (325 aa)
	A0A0D9ZEX8	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (126 aa)
	A0A0D9ZKV9	S10_plectin domain-containing protein. (183 aa)
	A0A0D9ZM16	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (219 aa)
	A0A0D9ZMT0	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (167 aa)
	A0A0E0AB55	Uncharacterized protein. (416 aa)
	A0A0E0ALX3	Uncharacterized protein. (425 aa)
	A0A0E0AQ57	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (110 aa)
	A0A0E0AQG8	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (319 aa)
	A0A0E0BET4	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (154 aa)
	A0A0E0BSX4	Uncharacterized protein. (113 aa)

Your Current Organism:

Oryza glumipatula

NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9Y7Q5	A0A0D9YN11	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	PUA domain-containing protein.	0.955
A0A0D9Y7Q5	A0A0D9YPL7	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.988
A0A0D9Y7Q5	A0A0D9YRD4	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.984
A0A0D9Y7Q5	A0A0D9YSE9	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.984
A0A0D9Y7Q5	A0A0D9Z9G7	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.973
A0A0D9Y7Q5	A0A0D9ZEX8	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.984
A0A0D9Y7Q5	A0A0D9ZKV9	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	S10_plectin domain-containing protein.	0.984
A0A0D9Y7Q5	A0A0D9ZM16	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.974
A0A0D9Y7Q5	A0A0D9ZMT0	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.	0.985
A0A0D9Y7Q5	A0A0E0AB55	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	Uncharacterized protein.	0.916
A0A0D9Y7Q5	A0A0E0ALX3	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	Uncharacterized protein.	0.972
A0A0D9Y7Q5	A0A0E0AQ57	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.990
A0A0D9Y7Q5	A0A0E0AQG8	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.970
A0A0D9Y7Q5	A0A0E0BET4	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.984
A0A0D9Y7Q5	A0A0E0BSX4	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	Uncharacterized protein.	0.977
A0A0D9YN11	A0A0D9Y7Q5	PUA domain-containing protein.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.955
A0A0D9YN11	A0A0D9YPL7	PUA domain-containing protein.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.964
A0A0D9YN11	A0A0D9YRD4	PUA domain-containing protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.969
A0A0D9YN11	A0A0D9YSE9	PUA domain-containing protein.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.963
A0A0D9YN11	A0A0D9Z9G7	PUA domain-containing protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.954