(14 nodes) Mixed, incl. Transcription factor, TCP, and FCS-Like Zinc finger 1/2/3 network (Oryza glumipatula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D9YFB6	TCP domain-containing protein. (296 aa)
	A0A0D9YJE2	TCP domain-containing protein. (319 aa)
	A0A0D9YUS6	Uncharacterized protein. (199 aa)
	A0A0D9ZHC3	TCP domain-containing protein. (183 aa)
	A0A0D9ZPR4	Uncharacterized protein. (180 aa)
	A0A0D9ZPU8	FLZ-type domain-containing protein. (152 aa)
	A0A0D9ZPV2	FLZ-type domain-containing protein. (127 aa)
	A0A0E0A1I8	TCP domain-containing protein. (311 aa)
	A0A0E0AEA3	Uncharacterized protein. (358 aa)
	A0A0E0B2U4	TCP domain-containing protein. (235 aa)
	A0A0E0B5L6	Homeobox domain-containing protein. (201 aa)
	A0A0E0BGU1	Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. (173 aa)
	A0A0E0BGU2	Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. (173 aa)
	A0A0E0BVA2	TCP domain-containing protein. (395 aa)

Your Current Organism:

Oryza glumipatula

NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9YFB6	A0A0D9YJE2	TCP domain-containing protein.	TCP domain-containing protein.	0.579
A0A0D9YFB6	A0A0D9YUS6	TCP domain-containing protein.	Uncharacterized protein.	0.471
A0A0D9YFB6	A0A0D9ZHC3	TCP domain-containing protein.	TCP domain-containing protein.	0.621
A0A0D9YFB6	A0A0D9ZPR4	TCP domain-containing protein.	Uncharacterized protein.	0.516
A0A0D9YFB6	A0A0D9ZPU8	TCP domain-containing protein.	FLZ-type domain-containing protein.	0.613
A0A0D9YFB6	A0A0D9ZPV2	TCP domain-containing protein.	FLZ-type domain-containing protein.	0.602
A0A0D9YFB6	A0A0E0AEA3	TCP domain-containing protein.	Uncharacterized protein.	0.514
A0A0D9YFB6	A0A0E0B5L6	TCP domain-containing protein.	Homeobox domain-containing protein.	0.550
A0A0D9YFB6	A0A0E0BGU1	TCP domain-containing protein.	Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.	0.519
A0A0D9YFB6	A0A0E0BGU2	TCP domain-containing protein.	Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.	0.523
A0A0D9YJE2	A0A0D9YFB6	TCP domain-containing protein.	TCP domain-containing protein.	0.579
A0A0D9YJE2	A0A0D9YUS6	TCP domain-containing protein.	Uncharacterized protein.	0.436
A0A0D9YJE2	A0A0D9ZPR4	TCP domain-containing protein.	Uncharacterized protein.	0.490
A0A0D9YJE2	A0A0D9ZPU8	TCP domain-containing protein.	FLZ-type domain-containing protein.	0.494
A0A0D9YJE2	A0A0D9ZPV2	TCP domain-containing protein.	FLZ-type domain-containing protein.	0.464
A0A0D9YJE2	A0A0E0A1I8	TCP domain-containing protein.	TCP domain-containing protein.	0.595
A0A0D9YJE2	A0A0E0AEA3	TCP domain-containing protein.	Uncharacterized protein.	0.419
A0A0D9YJE2	A0A0E0B2U4	TCP domain-containing protein.	TCP domain-containing protein.	0.549
A0A0D9YJE2	A0A0E0B5L6	TCP domain-containing protein.	Homeobox domain-containing protein.	0.415
A0A0D9YJE2	A0A0E0BGU1	TCP domain-containing protein.	Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.	0.459