5 items (Oryza glumipatula) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D9Y6I2	Uncharacterized protein. (363 aa)
	A0A0D9Y725	Aminotran_5 domain-containing protein. (512 aa)
	A0A0D9YDK0	Uncharacterized protein. (627 aa)
	A0A0D9YZ20	PALP domain-containing protein. (383 aa)
	A0A0E0BSK0	Amidohydro-rel domain-containing protein. (462 aa)

Your Current Organism:

Oryza glumipatula

NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9Y6I2	A0A0D9YZ20	Uncharacterized protein.	PALP domain-containing protein.	0.870
A0A0D9Y6I2	A0A0E0BSK0	Uncharacterized protein.	Amidohydro-rel domain-containing protein.	0.870
A0A0D9Y725	A0A0D9YDK0	Aminotran_5 domain-containing protein.	Uncharacterized protein.	0.915
A0A0D9Y725	A0A0D9YZ20	Aminotran_5 domain-containing protein.	PALP domain-containing protein.	0.953
A0A0D9Y725	A0A0E0BSK0	Aminotran_5 domain-containing protein.	Amidohydro-rel domain-containing protein.	0.692
A0A0D9YDK0	A0A0D9Y725	Uncharacterized protein.	Aminotran_5 domain-containing protein.	0.915
A0A0D9YDK0	A0A0D9YZ20	Uncharacterized protein.	PALP domain-containing protein.	0.883
A0A0D9YDK0	A0A0E0BSK0	Uncharacterized protein.	Amidohydro-rel domain-containing protein.	0.875
A0A0D9YZ20	A0A0D9Y6I2	PALP domain-containing protein.	Uncharacterized protein.	0.870
A0A0D9YZ20	A0A0D9Y725	PALP domain-containing protein.	Aminotran_5 domain-containing protein.	0.953
A0A0D9YZ20	A0A0D9YDK0	PALP domain-containing protein.	Uncharacterized protein.	0.883
A0A0E0BSK0	A0A0D9Y6I2	Amidohydro-rel domain-containing protein.	Uncharacterized protein.	0.870
A0A0E0BSK0	A0A0D9Y725	Amidohydro-rel domain-containing protein.	Aminotran_5 domain-containing protein.	0.692
A0A0E0BSK0	A0A0D9YDK0	Amidohydro-rel domain-containing protein.	Uncharacterized protein.	0.875