16 items (Oryza glumipatula) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D9YGL7	Uncharacterized protein. (481 aa)
	A0A0D9YNA6	Epimerase domain-containing protein. (346 aa)
	A0A0D9YS26	Uncharacterized protein; Belongs to the cytochrome P450 family. (533 aa)
	A0A0D9YV78	Phenylalanine ammonia-lyase. (713 aa)
	A0A0D9YWU9	Uncharacterized protein. (542 aa)
	A0A0D9YZX4	Epimerase domain-containing protein. (339 aa)
	A0A0D9Z268	Uncharacterized protein. (583 aa)
	A0A0D9ZIU7	Uncharacterized protein. (555 aa)
	A0A0D9ZN71	Phenylalanine ammonia-lyase. (707 aa)
	A0A0D9ZXE7	Uncharacterized protein. (262 aa)
	A0A0E0A5J2	Uncharacterized protein. (260 aa)
	A0A0E0A5Z3	Uncharacterized protein. (442 aa)
	A0A0E0ACQ9	Uncharacterized protein. (559 aa)
	A0A0E0AS53	Uncharacterized protein. (479 aa)
	A0A0E0AVX7	Epimerase domain-containing protein. (375 aa)
	A0A0E0B330	Uncharacterized protein. (440 aa)

Your Current Organism:

Oryza glumipatula

NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9YGL7	A0A0D9YNA6	Uncharacterized protein.	Epimerase domain-containing protein.	0.906
A0A0D9YGL7	A0A0D9YS26	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.871
A0A0D9YGL7	A0A0D9YV78	Uncharacterized protein.	Phenylalanine ammonia-lyase.	0.917
A0A0D9YGL7	A0A0D9YWU9	Uncharacterized protein.	Uncharacterized protein.	0.944
A0A0D9YGL7	A0A0D9YZX4	Uncharacterized protein.	Epimerase domain-containing protein.	0.906
A0A0D9YGL7	A0A0D9Z268	Uncharacterized protein.	Uncharacterized protein.	0.941
A0A0D9YGL7	A0A0D9ZIU7	Uncharacterized protein.	Uncharacterized protein.	0.943
A0A0D9YGL7	A0A0D9ZN71	Uncharacterized protein.	Phenylalanine ammonia-lyase.	0.904
A0A0D9YGL7	A0A0D9ZXE7	Uncharacterized protein.	Uncharacterized protein.	0.871
A0A0D9YGL7	A0A0E0A5J2	Uncharacterized protein.	Uncharacterized protein.	0.544
A0A0D9YGL7	A0A0E0A5Z3	Uncharacterized protein.	Uncharacterized protein.	0.879
A0A0D9YGL7	A0A0E0ACQ9	Uncharacterized protein.	Uncharacterized protein.	0.945
A0A0D9YGL7	A0A0E0AS53	Uncharacterized protein.	Uncharacterized protein.	0.582
A0A0D9YGL7	A0A0E0AVX7	Uncharacterized protein.	Epimerase domain-containing protein.	0.906
A0A0D9YGL7	A0A0E0B330	Uncharacterized protein.	Uncharacterized protein.	0.874
A0A0D9YNA6	A0A0D9YGL7	Epimerase domain-containing protein.	Uncharacterized protein.	0.906
A0A0D9YNA6	A0A0D9YS26	Epimerase domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.902
A0A0D9YNA6	A0A0D9YV78	Epimerase domain-containing protein.	Phenylalanine ammonia-lyase.	0.406
A0A0D9YNA6	A0A0D9YWU9	Epimerase domain-containing protein.	Uncharacterized protein.	0.925
A0A0D9YNA6	A0A0D9Z268	Epimerase domain-containing protein.	Uncharacterized protein.	0.903