39 items (Oryza glumipatula) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D9Y3J2	Uncharacterized protein. (161 aa)
	A0A0D9Y4G6	Dof-type domain-containing protein. (222 aa)
	A0A0D9Y4K9	Protein kinase domain-containing protein. (596 aa)
	A0A0D9Y9R3	Uncharacterized protein. (217 aa)
	A0A0D9YB05	Dilute domain-containing protein. (603 aa)
	A0A0D9YEV0	Protein kinase domain-containing protein. (671 aa)
	A0A0D9YF72	Dof-type domain-containing protein. (205 aa)
	A0A0D9YJB2	Uncharacterized protein. (186 aa)
	A0A0D9YNM3	Uncharacterized protein. (306 aa)
	A0A0D9YT82	Uncharacterized protein. (318 aa)
	A0A0D9YTF5	AP2/ERF domain-containing protein. (319 aa)
	A0A0D9YVB0	Uncharacterized protein. (199 aa)
	A0A0D9YVQ9	Uncharacterized protein. (332 aa)
	A0A0D9Z1I3	Uncharacterized protein. (150 aa)
	A0A0D9Z6C6	Uncharacterized protein. (425 aa)
	A0A0D9ZAM1	Dof-type domain-containing protein. (526 aa)
	A0A0D9ZEX4	AP2/ERF domain-containing protein. (242 aa)
	A0A0D9ZRM3	AP2/ERF domain-containing protein. (232 aa)
	A0A0D9ZTD2	Dof-type domain-containing protein. (352 aa)
	A0A0D9ZTK5	AP2/ERF domain-containing protein. (502 aa)
	A0A0D9ZVF5	Protein kinase domain-containing protein. (815 aa)
	A0A0D9ZXB5	AP2/ERF domain-containing protein. (221 aa)
	A0A0E0A0J4	AP2/ERF domain-containing protein. (261 aa)
	A0A0E0A160	AP2/ERF domain-containing protein. (193 aa)
	A0A0E0A4X8	AP2/ERF domain-containing protein. (255 aa)
	A0A0E0A5E6	AP2/ERF domain-containing protein. (349 aa)
	A0A0E0A5J8	AP2/ERF domain-containing protein. (184 aa)
	A0A0E0A6B2	AP2/ERF domain-containing protein. (207 aa)
	A0A0E0A870	Dof-type domain-containing protein. (286 aa)
	A0A0E0ACB2	Uncharacterized protein. (436 aa)
	A0A0E0ACX7	Uncharacterized protein. (115 aa)
	A0A0E0AHF8	Dof-type domain-containing protein. (358 aa)
	A0A0E0AV53	AP2/ERF domain-containing protein. (84 aa)
	A0A0E0AXT4	AP2/ERF domain-containing protein. (189 aa)
	A0A0E0BEU2	Uncharacterized protein. (216 aa)
	A0A0E0BH71	AP2/ERF domain-containing protein. (201 aa)
	A0A0E0BQ36	AIG1-type G domain-containing protein. (871 aa)
	A0A0E0BU95	Dof-type domain-containing protein. (354 aa)
	A0A0E0BUX5	AP2/ERF domain-containing protein. (250 aa)

Your Current Organism:

Oryza glumipatula

NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9Y3J2	A0A0D9Y4G6	Uncharacterized protein.	Dof-type domain-containing protein.	0.548
A0A0D9Y3J2	A0A0D9Y4K9	Uncharacterized protein.	Protein kinase domain-containing protein.	0.492
A0A0D9Y3J2	A0A0D9Y9R3	Uncharacterized protein.	Uncharacterized protein.	0.464
A0A0D9Y3J2	A0A0D9YB05	Uncharacterized protein.	Dilute domain-containing protein.	0.486
A0A0D9Y3J2	A0A0D9YEV0	Uncharacterized protein.	Protein kinase domain-containing protein.	0.505
A0A0D9Y3J2	A0A0D9YF72	Uncharacterized protein.	Dof-type domain-containing protein.	0.546
A0A0D9Y3J2	A0A0D9YJB2	Uncharacterized protein.	Uncharacterized protein.	0.500
A0A0D9Y3J2	A0A0D9YNM3	Uncharacterized protein.	Uncharacterized protein.	0.473
A0A0D9Y3J2	A0A0D9YT82	Uncharacterized protein.	Uncharacterized protein.	0.529
A0A0D9Y3J2	A0A0D9YTF5	Uncharacterized protein.	AP2/ERF domain-containing protein.	0.519
A0A0D9Y3J2	A0A0D9YVB0	Uncharacterized protein.	Uncharacterized protein.	0.518
A0A0D9Y3J2	A0A0D9YVQ9	Uncharacterized protein.	Uncharacterized protein.	0.515
A0A0D9Y3J2	A0A0D9Z1I3	Uncharacterized protein.	Uncharacterized protein.	0.606
A0A0D9Y3J2	A0A0D9Z6C6	Uncharacterized protein.	Uncharacterized protein.	0.435
A0A0D9Y3J2	A0A0D9ZAM1	Uncharacterized protein.	Dof-type domain-containing protein.	0.530
A0A0D9Y3J2	A0A0D9ZEX4	Uncharacterized protein.	AP2/ERF domain-containing protein.	0.591
A0A0D9Y3J2	A0A0D9ZRM3	Uncharacterized protein.	AP2/ERF domain-containing protein.	0.483
A0A0D9Y3J2	A0A0D9ZTD2	Uncharacterized protein.	Dof-type domain-containing protein.	0.537
A0A0D9Y3J2	A0A0D9ZVF5	Uncharacterized protein.	Protein kinase domain-containing protein.	0.504
A0A0D9Y3J2	A0A0D9ZXB5	Uncharacterized protein.	AP2/ERF domain-containing protein.	0.584