(10 nodes) BRCA1-A complex, and BRCT domain superfamily network (Oryza glumipatula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D9YJU6	BRCT domain-containing protein. (686 aa)
	A0A0D9Z9H3	Uncharacterized protein. (662 aa)
	A0A0D9ZU56	Uncharacterized protein. (642 aa)
	A0A0D9ZYF6	Uncharacterized protein. (602 aa)
	A0A0D9ZYX8	PsbP domain-containing protein. (253 aa)
	A0A0E0A284	BRCC36_C domain-containing protein. (541 aa)
	A0A0E0A529	Uncharacterized protein. (286 aa)
	A0A0E0AED3	Uncharacterized protein. (373 aa)
	A0A0E0BQI0	Uncharacterized protein. (345 aa)
	A0A0E0BR59	RING-type domain-containing protein. (389 aa)

Your Current Organism:

Oryza glumipatula

NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9YJU6	A0A0D9Z9H3	BRCT domain-containing protein.	Uncharacterized protein.	0.604
A0A0D9YJU6	A0A0D9ZYX8	BRCT domain-containing protein.	PsbP domain-containing protein.	0.759
A0A0D9YJU6	A0A0E0A284	BRCT domain-containing protein.	BRCC36_C domain-containing protein.	0.594
A0A0D9YJU6	A0A0E0A529	BRCT domain-containing protein.	Uncharacterized protein.	0.708
A0A0D9YJU6	A0A0E0BQI0	BRCT domain-containing protein.	Uncharacterized protein.	0.527
A0A0D9YJU6	A0A0E0BR59	BRCT domain-containing protein.	RING-type domain-containing protein.	0.604
A0A0D9Z9H3	A0A0D9YJU6	Uncharacterized protein.	BRCT domain-containing protein.	0.604
A0A0D9Z9H3	A0A0D9ZU56	Uncharacterized protein.	Uncharacterized protein.	0.604
A0A0D9Z9H3	A0A0D9ZYF6	Uncharacterized protein.	Uncharacterized protein.	0.590
A0A0D9Z9H3	A0A0E0A529	Uncharacterized protein.	Uncharacterized protein.	0.570
A0A0D9ZU56	A0A0D9Z9H3	Uncharacterized protein.	Uncharacterized protein.	0.604
A0A0D9ZU56	A0A0D9ZYX8	Uncharacterized protein.	PsbP domain-containing protein.	0.759
A0A0D9ZU56	A0A0E0A284	Uncharacterized protein.	BRCC36_C domain-containing protein.	0.594
A0A0D9ZU56	A0A0E0A529	Uncharacterized protein.	Uncharacterized protein.	0.708
A0A0D9ZU56	A0A0E0BQI0	Uncharacterized protein.	Uncharacterized protein.	0.527
A0A0D9ZU56	A0A0E0BR59	Uncharacterized protein.	RING-type domain-containing protein.	0.604
A0A0D9ZYF6	A0A0D9Z9H3	Uncharacterized protein.	Uncharacterized protein.	0.590
A0A0D9ZYF6	A0A0D9ZYX8	Uncharacterized protein.	PsbP domain-containing protein.	0.759
A0A0D9ZYF6	A0A0E0A529	Uncharacterized protein.	Uncharacterized protein.	0.690
A0A0D9ZYF6	A0A0E0BR59	Uncharacterized protein.	RING-type domain-containing protein.	0.590