60 items (Oryza glumipatula) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D9Y356	Uncharacterized protein; Belongs to the actin family. (294 aa)
	A0A0D9Y5P7	Uncharacterized protein. (182 aa)
	A0A0D9Y7Q1	BCNT-C domain-containing protein. (264 aa)
	A0A0D9Y852	Uncharacterized protein. (613 aa)
	A0A0D9YFT0	Uncharacterized protein. (1243 aa)
	A0A0D9YH09	RuvB-like helicase; Belongs to the RuvB family. (419 aa)
	A0A0D9YK37	Uncharacterized protein. (1301 aa)
	A0A0D9YKX6	Enhancer of polycomb-like protein. (846 aa)
	A0A0D9YLA2	Uncharacterized protein. (2205 aa)
	A0A0D9YQ30	Uncharacterized protein. (501 aa)
	A0A0D9YT17	Uncharacterized protein. (987 aa)
	A0A0D9YV70	Uncharacterized protein. (746 aa)
	A0A0D9YWP3	Uncharacterized protein. (2045 aa)
	A0A0D9YYJ8	Uncharacterized protein. (996 aa)
	A0A0D9Z0B3	Ubiquitin carboxyl-terminal hydrolase. (331 aa)
	A0A0D9Z1X8	PHD finger protein ING. (337 aa)
	A0A0D9Z2F1	Histone H2A; Belongs to the histone H2A family. (138 aa)
	A0A0D9Z2I0	Uncharacterized protein. (1121 aa)
	A0A0D9Z7E7	Uncharacterized protein. (1457 aa)
	A0A0D9Z7T4	Uncharacterized protein. (109 aa)
	A0A0D9Z7U8	HIT-type domain-containing protein. (220 aa)
	A0A0D9ZD48	Uncharacterized protein. (489 aa)
	A0A0D9ZEU6	PAPA-1 domain-containing protein. (506 aa)
	A0A0D9ZH30	Uncharacterized protein. (1164 aa)
	A0A0D9ZH32	Uncharacterized protein; Belongs to the actin family. (706 aa)
	A0A0D9ZP93	F-box domain-containing protein. (271 aa)
	A0A0D9ZR51	Uncharacterized protein. (1051 aa)
	A0A0D9ZTH5	Uncharacterized protein. (1268 aa)
	A0A0D9ZYR7	Uncharacterized protein. (1447 aa)
	A0A0E0A262	SANT domain-containing protein. (462 aa)
	A0A0E0A3M4	Uncharacterized protein. (1827 aa)
	A0A0E0A3T6	Chromo domain-containing protein. (1725 aa)
	A0A0E0A4Q2	Uncharacterized protein. (410 aa)
	A0A0E0A610	RuvB-like helicase; Belongs to the RuvB family. (477 aa)
	A0A0E0A7L1	Uncharacterized protein. (60 aa)
	A0A0E0A7S4	Uncharacterized protein. (540 aa)
	A0A0E0AC52	Uncharacterized protein. (139 aa)
	A0A0E0AED1	Uncharacterized protein. (339 aa)
	A0A0E0AGG7	RuvB-like helicase; Belongs to the RuvB family. (543 aa)
	A0A0E0AIG4	Uncharacterized protein. (541 aa)
	A0A0E0ALM7	Uncharacterized protein. (1644 aa)
	A0A0E0ALW1	RuvB-like helicase; Belongs to the RuvB family. (333 aa)
	A0A0E0AMQ1	Uncharacterized protein. (96 aa)
	A0A0E0AMZ2	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (451 aa)
	A0A0E0AN73	Uncharacterized protein. (714 aa)
	A0A0E0APM2	Uncharacterized protein. (1840 aa)
	A0A0E0AR52	Hydrolase_4 domain-containing protein. (347 aa)
	A0A0E0ARI9	Uncharacterized protein. (2207 aa)
	A0A0E0ARM1	Uncharacterized protein. (1168 aa)
	A0A0E0ART5	YL1_C domain-containing protein. (365 aa)
	A0A0E0AST2	Uncharacterized protein. (1156 aa)
	A0A0E0ATD6	Helicase C-terminal domain-containing protein. (134 aa)
	A0A0E0ATS6	Uncharacterized protein. (173 aa)
	A0A0E0AU88	Enhancer of polycomb-like protein. (459 aa)
	A0A0E0B0Q0	GFO_IDH_MocA domain-containing protein. (357 aa)
	A0A0E0B0U0	Enhancer of polycomb-like protein. (468 aa)
	A0A0E0B153	Uncharacterized protein. (852 aa)
	A0A0E0BBA7	Uncharacterized protein. (1443 aa)
	A0A0E0BHZ2	ULP_PROTEASE domain-containing protein. (869 aa)
	A0A0E0BK18	MRG domain-containing protein. (425 aa)

Your Current Organism:

Oryza glumipatula

NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9Y356	A0A0D9YFT0	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.876
A0A0D9Y356	A0A0D9YH09	Uncharacterized protein; Belongs to the actin family.	RuvB-like helicase; Belongs to the RuvB family.	0.989
A0A0D9Y356	A0A0D9YK37	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.876
A0A0D9Y356	A0A0D9YQ30	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.852
A0A0D9Y356	A0A0D9YT17	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.876
A0A0D9Y356	A0A0D9YV70	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.815
A0A0D9Y356	A0A0D9YWP3	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.822
A0A0D9Y356	A0A0D9YYJ8	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.815
A0A0D9Y356	A0A0D9Z0B3	Uncharacterized protein; Belongs to the actin family.	Ubiquitin carboxyl-terminal hydrolase.	0.903
A0A0D9Y356	A0A0D9Z2I0	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.815
A0A0D9Y356	A0A0D9Z7E7	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.989
A0A0D9Y356	A0A0D9ZEU6	Uncharacterized protein; Belongs to the actin family.	PAPA-1 domain-containing protein.	0.954
A0A0D9Y356	A0A0D9ZH30	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.876
A0A0D9Y356	A0A0D9ZH32	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein; Belongs to the actin family.	0.997
A0A0D9Y356	A0A0D9ZR51	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.876
A0A0D9Y356	A0A0D9ZTH5	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.997
A0A0D9Y356	A0A0D9ZYR7	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.815
A0A0D9Y356	A0A0E0A3M4	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.876
A0A0D9Y356	A0A0E0A3T6	Uncharacterized protein; Belongs to the actin family.	Chromo domain-containing protein.	0.815
A0A0D9Y356	A0A0E0A4Q2	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.456