30 items (Oryza glumipatula) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0ATW1	Uncharacterized protein. (274 aa)
	A0A0E0ATT3	Uncharacterized protein. (211 aa)
	A0A0E0ACA9	Uncharacterized protein. (329 aa)
	A0A0E0A990	Aminotran_1_2 domain-containing protein. (268 aa)
	A0A0E0A3T8	Uncharacterized protein. (480 aa)
	A0A0D9ZZH4	Phenylalanine ammonia-lyase. (666 aa)
	A0A0D9ZN72	Phenylalanine ammonia-lyase. (716 aa)
	A0A0D9ZN71	Phenylalanine ammonia-lyase. (707 aa)
	A0A0D9YV78	Phenylalanine ammonia-lyase. (713 aa)
	A0A0D9YMU2	Uncharacterized protein. (533 aa)
	A0A0D9YV77	Phenylalanine ammonia-lyase. (713 aa)
	A0A0D9YV76	Phenylalanine ammonia-lyase. (718 aa)
	A0A0D9YV74	Phenylalanine ammonia-lyase. (701 aa)
	A0A0D9YTS4	Uncharacterized protein; Belongs to the GST superfamily. (234 aa)
	A0A0D9YQZ7	Aminotran_1_2 domain-containing protein. (502 aa)
	A0A0D9YQY2	Aminotran_1_2 domain-containing protein. (349 aa)
	A0A0D9YQX8	Aminotran_1_2 domain-containing protein. (434 aa)
	A0A0D9YQX7	Uncharacterized protein. (116 aa)
	A0A0D9YNF7	Uncharacterized protein. (274 aa)
	A0A0D9YNF8	Uncharacterized protein. (160 aa)
	A0A0D9Y431	Aminotran_1_2 domain-containing protein. (451 aa)
	A0A0D9YNR3	Fumarylacetoacetase. (429 aa)
	A0A0D9YHG7	Uncharacterized protein. (474 aa)
	A0A0E0BTR9	NAM-associated domain-containing protein. (179 aa)
	A0A0E0BQE5	Uncharacterized protein; Belongs to the GST superfamily. (234 aa)
	A0A0E0BMJ1	Phenylalanine ammonia-lyase. (700 aa)
	A0A0E0BLM6	Aminotran_1_2 domain-containing protein. (477 aa)
	A0A0E0BK70	Aminotran_1_2 domain-containing protein. (429 aa)
	A0A0E0BH87	Uncharacterized protein. (216 aa)
	A0A0E0AZF5	Uncharacterized protein. (217 aa)

Your Current Organism:

Oryza glumipatula

NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9Y431	A0A0D9YMU2	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.799
A0A0D9Y431	A0A0D9YQX7	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.671
A0A0D9Y431	A0A0D9YQX8	Aminotran_1_2 domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.671
A0A0D9Y431	A0A0D9YQY2	Aminotran_1_2 domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.671
A0A0D9Y431	A0A0D9YQZ7	Aminotran_1_2 domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.671
A0A0D9Y431	A0A0D9YV74	Aminotran_1_2 domain-containing protein.	Phenylalanine ammonia-lyase.	0.405
A0A0D9Y431	A0A0D9YV76	Aminotran_1_2 domain-containing protein.	Phenylalanine ammonia-lyase.	0.405
A0A0D9Y431	A0A0D9YV77	Aminotran_1_2 domain-containing protein.	Phenylalanine ammonia-lyase.	0.405
A0A0D9Y431	A0A0D9YV78	Aminotran_1_2 domain-containing protein.	Phenylalanine ammonia-lyase.	0.405
A0A0D9Y431	A0A0D9ZN71	Aminotran_1_2 domain-containing protein.	Phenylalanine ammonia-lyase.	0.405
A0A0D9Y431	A0A0D9ZN72	Aminotran_1_2 domain-containing protein.	Phenylalanine ammonia-lyase.	0.405
A0A0D9Y431	A0A0D9ZZH4	Aminotran_1_2 domain-containing protein.	Phenylalanine ammonia-lyase.	0.405
A0A0D9Y431	A0A0E0A990	Aminotran_1_2 domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.671
A0A0D9Y431	A0A0E0ATT3	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.405
A0A0D9Y431	A0A0E0BK70	Aminotran_1_2 domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.872
A0A0D9Y431	A0A0E0BLM6	Aminotran_1_2 domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.671
A0A0D9Y431	A0A0E0BMJ1	Aminotran_1_2 domain-containing protein.	Phenylalanine ammonia-lyase.	0.405
A0A0D9YMU2	A0A0D9Y431	Uncharacterized protein.	Aminotran_1_2 domain-containing protein.	0.799
A0A0D9YMU2	A0A0D9YNR3	Uncharacterized protein.	Fumarylacetoacetase.	0.800
A0A0D9YMU2	A0A0D9YQX7	Uncharacterized protein.	Uncharacterized protein.	0.893