(25 nodes) Ino80 complex network (Oryza glumipatula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0BRB6	Uncharacterized protein. (1373 aa)
	A0A0E0BPK2	Uncharacterized protein. (233 aa)
	A0A0E0B6U6	Uncharacterized protein. (234 aa)
	A0A0E0B323	Uncharacterized protein. (200 aa)
	A0A0E0AX69	Uncharacterized protein. (558 aa)
	A0A0E0AT31	Uncharacterized protein. (326 aa)
	A0A0E0ALW1	RuvB-like helicase; Belongs to the RuvB family. (333 aa)
	A0A0E0AJA6	Uncharacterized protein. (929 aa)
	A0A0E0AGS1	FHA domain-containing protein. (919 aa)
	A0A0E0AGG7	RuvB-like helicase; Belongs to the RuvB family. (543 aa)
	A0A0E0A610	RuvB-like helicase; Belongs to the RuvB family. (477 aa)
	A0A0D9ZTH5	Uncharacterized protein. (1268 aa)
	A0A0D9ZT65	Uncharacterized protein. (405 aa)
	A0A0D9ZH32	Uncharacterized protein; Belongs to the actin family. (706 aa)
	A0A0D9ZEJ3	FHA domain-containing protein. (857 aa)
	A0A0D9Z7E7	Uncharacterized protein. (1457 aa)
	A0A0D9Z783	Uncharacterized protein. (910 aa)
	A0A0D9Z0B3	Ubiquitin carboxyl-terminal hydrolase. (331 aa)
	A0A0D9YTI6	Uncharacterized protein. (339 aa)
	A0A0D9YNM4	Uncharacterized protein. (146 aa)
	A0A0D9YNA0	Ubiquitin carboxyl-terminal hydrolase. (445 aa)
	A0A0D9YMR0	Uncharacterized protein. (236 aa)
	A0A0D9YH09	RuvB-like helicase; Belongs to the RuvB family. (419 aa)
	A0A0D9YCK9	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (985 aa)
	A0A0D9Y590	PWWP domain-containing protein. (388 aa)

Your Current Organism:

Oryza glumipatula

NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9YH09	A0A0D9YNA0	RuvB-like helicase; Belongs to the RuvB family.	Ubiquitin carboxyl-terminal hydrolase.	0.887
A0A0D9YH09	A0A0D9YTI6	RuvB-like helicase; Belongs to the RuvB family.	Uncharacterized protein.	0.437
A0A0D9YH09	A0A0D9Z0B3	RuvB-like helicase; Belongs to the RuvB family.	Ubiquitin carboxyl-terminal hydrolase.	0.887
A0A0D9YH09	A0A0D9Z7E7	RuvB-like helicase; Belongs to the RuvB family.	Uncharacterized protein.	0.978
A0A0D9YH09	A0A0D9ZEJ3	RuvB-like helicase; Belongs to the RuvB family.	FHA domain-containing protein.	0.797
A0A0D9YH09	A0A0D9ZH32	RuvB-like helicase; Belongs to the RuvB family.	Uncharacterized protein; Belongs to the actin family.	0.985
A0A0D9YH09	A0A0D9ZT65	RuvB-like helicase; Belongs to the RuvB family.	Uncharacterized protein.	0.437
A0A0D9YH09	A0A0D9ZTH5	RuvB-like helicase; Belongs to the RuvB family.	Uncharacterized protein.	0.945
A0A0D9YH09	A0A0E0A610	RuvB-like helicase; Belongs to the RuvB family.	RuvB-like helicase; Belongs to the RuvB family.	0.995
A0A0D9YH09	A0A0E0AGS1	RuvB-like helicase; Belongs to the RuvB family.	FHA domain-containing protein.	0.797
A0A0D9YH09	A0A0E0ALW1	RuvB-like helicase; Belongs to the RuvB family.	RuvB-like helicase; Belongs to the RuvB family.	0.995
A0A0D9YNA0	A0A0D9YH09	Ubiquitin carboxyl-terminal hydrolase.	RuvB-like helicase; Belongs to the RuvB family.	0.887
A0A0D9YNA0	A0A0D9ZEJ3	Ubiquitin carboxyl-terminal hydrolase.	FHA domain-containing protein.	0.803
A0A0D9YNA0	A0A0D9ZH32	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein; Belongs to the actin family.	0.896
A0A0D9YNA0	A0A0D9ZTH5	Ubiquitin carboxyl-terminal hydrolase.	Uncharacterized protein.	0.971
A0A0D9YNA0	A0A0E0A610	Ubiquitin carboxyl-terminal hydrolase.	RuvB-like helicase; Belongs to the RuvB family.	0.755
A0A0D9YNA0	A0A0E0AGG7	Ubiquitin carboxyl-terminal hydrolase.	RuvB-like helicase; Belongs to the RuvB family.	0.887
A0A0D9YNA0	A0A0E0AGS1	Ubiquitin carboxyl-terminal hydrolase.	FHA domain-containing protein.	0.803
A0A0D9YNA0	A0A0E0ALW1	Ubiquitin carboxyl-terminal hydrolase.	RuvB-like helicase; Belongs to the RuvB family.	0.755
A0A0D9YTI6	A0A0D9YH09	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.437