(9 nodes) Protein localization to endoplasmic reticulum exit site network (Oryza glumipatula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0E0A9J1	Uncharacterized protein. (105 aa)
	A0A0E0BSC4	Bap31 domain-containing protein. (129 aa)
	A0A0E0AI84	Uncharacterized protein. (214 aa)
	A0A0E0A3X4	Protein transport protein sec16. (1505 aa)
	A0A0D9ZWJ9	Uncharacterized protein. (221 aa)
	A0A0D9ZFT2	Uncharacterized protein. (217 aa)
	A0A0D9YXX0	Bap31 domain-containing protein. (132 aa)
	A0A0D9YRB3	Uncharacterized protein. (226 aa)
	A0A0D9YL30	Protein transport protein sec16. (1518 aa)

Your Current Organism:

Oryza glumipatula

NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula Steud.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D9YRB3	A0A0D9ZFT2	Uncharacterized protein.	Uncharacterized protein.	0.803
A0A0D9YRB3	A0A0E0AI84	Uncharacterized protein.	Uncharacterized protein.	0.801
A0A0D9ZFT2	A0A0D9YRB3	Uncharacterized protein.	Uncharacterized protein.	0.803
A0A0D9ZFT2	A0A0D9ZWJ9	Uncharacterized protein.	Uncharacterized protein.	0.734
A0A0D9ZFT2	A0A0E0A9J1	Uncharacterized protein.	Uncharacterized protein.	0.807
A0A0D9ZWJ9	A0A0D9ZFT2	Uncharacterized protein.	Uncharacterized protein.	0.734
A0A0D9ZWJ9	A0A0E0AI84	Uncharacterized protein.	Uncharacterized protein.	0.735
A0A0E0A9J1	A0A0D9ZFT2	Uncharacterized protein.	Uncharacterized protein.	0.807
A0A0E0A9J1	A0A0E0AI84	Uncharacterized protein.	Uncharacterized protein.	0.807
A0A0E0AI84	A0A0D9YRB3	Uncharacterized protein.	Uncharacterized protein.	0.801
A0A0E0AI84	A0A0D9ZWJ9	Uncharacterized protein.	Uncharacterized protein.	0.735
A0A0E0AI84	A0A0E0A9J1	Uncharacterized protein.	Uncharacterized protein.	0.807